Entry information : EgrPrx[P]127 ( Eucgr.H03668 / Egrandis_v1_0.041389m)
Entry ID 8131
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2012-02-16 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-21 (Christophe Dunand)
Peroxidase information: EgrPrx[P]127 ( Eucgr.H03668 / Egrandis_v1_0.041389m)
Name (synonym) EgrPrx[P]127 ( Eucgr.H03668 / Egrandis_v1_0.041389m)
Class Class III peroxidase     [Orthogroup: Prx013]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]127
start..stop
S start..stop
EguPrx[P]127 556 0 1..293 1..293
EglPrx[P]127 512 0 1..293 1..268
EcamPrx[P]128 401 2e-142 10..277 1..298
EgrPrx[P]128 369 8e-130 29..293 1..282
Literature and cross-references EgrPrx[P]127 ( Eucgr.H03668 / Egrandis_v1_0.041389m)
DNA ref. Phytozome 11:   scaffold_8 (53802268..53800020)
Protein sequence: EgrPrx[P]127 ( Eucgr.H03668 / Egrandis_v1_0.041389m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   293 (269)
PWM (Da):   %s   31263.34 (28676.9)  
PI (pH):   %s   5.13 (4.64) Peptide Signal:   %s   cut: 25 range:25-293
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MLIGRYSLLL ALAFLALHHG VCHGGKLKMM FYHESCLRAE TIVRNITWSR VAAGCDASVL LDSTNGTSAE KEAIPNRSLE EFDVINEIKD ELEVECPLTV SCADILALTA QDTVSFQFGK  AMWGVLSGRR DGRVSLASEA LDNLPSPASD FNALRQQFAD NGLGVPDLVC LSGAHCVVFA KRLFNFTANN DTNSSLDRGN GNAAMLKAQC SSPCNTVGMD PNSSSSFDSH YFVALSQNQG 
LFKSDATLLT DKRAANFAWI YQxxxxYSMK KMDTIAVLTD DEGEIGKNCR VVN 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from Phytozome (end of exon 1 is missing, frame shift in the exon 4). No EST. PS, FHDC and VALS are missing.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTTGATTG GCAGATACTC TCTCTTATTA GCTCTTGCAT TTCTAGCACT TCATCATGGG GTTTGCCATG GAGGCAAGCT CAAGATGATG TTCTACCACG AGAGCTGTCT GCGGGCTGAG  ACGATCGTGA GGAACATCAC TTGGAGCAGA GTTGCAGCCT ATGAAGCACC GACATTCTCC AAGAACTTTC GTGTAGTGTC GTGTCGGACA CTTCGACATG TGTCCAACAG TCTTGGACAC  TTTCGGACAC TCGGTCAACA CTTGTCGAAA AATCTGACAT CTGGTCAACT TTCTTGACAC TCAGAATTCT GACATATGAG TTTTCGACAA GTGATTTTGA TATCGAAGTC AATGTTAAAA  ATTCAATAAA TGAGAGGTCA ATATGTGGAT GTGTGTGTGT GAAAATAAAA CACAATAATA AAAATAGTAA ATGGAGAAAG GAGAAAAACC TAGTCTTATC TTCTCTTCTG ACTCCCATTT  TCTGTGATAC ACAATTCACC CTTTAAGTTT TTTTTCTCCT CTTCCAACAT ATCTAACATG AGGGTCCAGA ATATGAATCG CTTGTTTTTT CTCCAAGTTT TATGAATTAT TGAAATAGAG  TTGAATTTGT CAAATTGAAA CAATGAATGA TATTAATAAA TTGTGGATTA ATGTTTTTAG TGTATATTCA TTCTAGGCTT TATTTATTTA TTTATGAGTT TGATTCAAAT TAATTTGATT  GAAATAATCA TAAAAATTAT AATTTATTAA AAATATATAT TTAATATACA ACGTGTCCTC ACGTGTTGGA ATTTTTTGTT TTTTGATAAA CGACGTGTCG GCGTGTCATG TCGTGTCGTG  TCGTGTGTCG TGCGTCGGTG TCAGTACTAC TTAGGTTGCA GCAAACCTGC GTTACCAGCC AAGCTTCTGA GGCTGCATTT TCAACGACTG CTTTGTTAGG GTCTGTGTAC ATACAAGATC  ATAACGCATG TTCTCATGAG TGCAATCCAG CAATGCAATG GGTCGTTGAA TTTACAGAAG AAGTGGGAAA CGATGATAAG TGAAGTCGCG TGAGCTCTTC CTGGCTAACT TATGTCACCC  TAACTCGTGC GTAGTACTTA ATCCTATGGT TCAAAACGCG AGGGAGAACG ACGTGGCTTG ATGTTTGTTT CGATATCTTG ATCTCTATTC TCATGCGCCT GCTCATCGAA TAACGAAAGT  TCGACATATA TTGCTATGGA CTAGCAAAAT AGCCCTATTT GTCTAACCAA AATGATCTAT TGTCCACGGG ATAAATATTT GCAGGGTTGT GATGCGTCAG TGCTGTTAGA CTCAACTAAC  GGAACAAGCG CCGAGAAGGA AGCCATTCCG AACCGGTCTC TTGAAGAATT CGACGTCATC AACGAGATAA AGGATGAGCT CGAAGTGGAA TGCCCCCTCA CTGTCTCCTG TGCCGATATC  CTTGCGCTCA CTGCCCAGGA CACCGTCTCC TTTCAGGTAC TACTCGAGCT GAAACTTCGG CTTGTCCGTT AATTAAAATT TTGGAATTTG CAACTCTTCA TTGTCCCTTC TAGGTAGTGA  ACATATAGTG ACATGAATTC AAATGATGTG GGCAGTTTGG AAAGGCAATG TGGGGGGTAC TGAGTGGTCG GAGAGACGGC AGAGTTTCAT TAGCTTCGGA AGCCTTGGAC AATCTTCCAT  CACCTGCTTC CGATTTCAAC GCCCTTCGGC AACAATTTGC CGATAATGGC CTGGGAGTCC CTGATCTTGT TTGCCTTTCA GGTTTGAAAT TCATTAACTT TTATGTGTTT CTTTAATCGT  TCTATTCATT GCAAATTCCT ATCTTAACAA TTTTGCAAGG CATTCCAGCT AATTTGATTA CGAGATCTTT GTTTCGGGTG CGCACACCAT CAGAGGGGCG CATTGTGTGG TGTTCGCCAA  GAGGCTCTTC AACTTCACCG CCAACAATGA CACCAACTCC TCGCTCGATC GGGGCAATGG CAATGCCGCC ATGCTGAAGG CTCAGTGCTC GAGCCCTTGC AACACTGTCG GGATGGACCC  CAACAGTTCC TCCTCGTTCG ATAGCCACTA CTTTGTAGCT CTCTCCCAAA ACCAAGGCCT ATTCAAGTCC GACGCGACGC TGCTCACGGA CAAGCGCGCG GCCAATTTTG CTTGGATTTA 
CCAGAnnnnn nnnnnnTATT CAATGAAGAA GATGGACACC ATTGCAGTTT TAACTGATGA TGAAGGAGAA ATAGGAAAGA ATTGCAGGGT TGTTAATTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTTGATTG GCAGATACTC TCTCTTATTA GCTCTTGCAT TTCTAGCACT TCATCATGGG GTTTGCCATG GAGGCAAGCT CAAGATGATG TTCTACCACG AGAGCTGTCT GCGGGCTGAG  ACGATCGTGA GGAACATCAC TTGGAGCAGA GTTGCAGCCG GTTGTGATGC GTCAGTGCTG TTAGACTCAA CTAACGGAAC AAGCGCCGAG AAGGAAGCCA TTCCGAACCG GTCTCTTGAA  GAATTCGACG TCATCAACGA GATAAAGGAT GAGCTCGAAG TGGAATGCCC CCTCACTGTC TCCTGTGCCG ATATCCTTGC GCTCACTGCC CAGGACACCG TCTCCTTTCA GTTTGGAAAG  GCAATGTGGG GGGTACTGAG TGGTCGGAGA GACGGCAGAG TTTCATTAGC TTCGGAAGCC TTGGACAATC TTCCATCACC TGCTTCCGAT TTCAACGCCC TTCGGCAACA ATTTGCCGAT  AATGGCCTGG GAGTCCCTGA TCTTGTTTGC CTTTCAGGGG CGCATTGTGT GGTGTTCGCC AAGAGGCTCT TCAACTTCAC CGCCAACAAT GACACCAACT CCTCGCTCGA TCGGGGCAAT  GGCAATGCCG CCATGCTGAA GGCTCAGTGC TCGAGCCCTT GCAACACTGT CGGGATGGAC CCCAACAGTT CCTCCTCGTT CGATAGCCAC TACTTTGTAG CTCTCTCCCA AAACCAAGGC  CTATTCAAGT CCGACGCGAC GCTGCTCACG GACAAGCGCG CGGCCAATTT TGCTTGGATT TACCAGAnnn nnnnnnnnTA TTCAATGAAG AAGATGGACA CCATTGCAGT TTTAACTGAT 
GATGAAGGAG AAATAGGAAA GAATTGCAGG GTTGTTAATT AA 

Retrieve as FASTA