Entry information : EgrPrx[P]159
Entry ID 8155
Creation 2011-02-25 (Qiang Li)
Last sequence changes 2012-02-16 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-12 (Christophe Dunand)
Peroxidase information: EgrPrx[P]159
Name EgrPrx[P]159
Class Class III peroxidase     [Orthogroup: Prx007]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]159
start..stop
S start..stop
EcamPrx[P]159 441 1e-159 2..238 1..246
EguPrx[P]159 435 1e-157 1..240 1..242
EgrPrx[P]160 381 4e-136 1..216 1..240
EguPrx[P]160 380 9e-136 1..216 1..240
Literature and cross-references EgrPrx[P]159
DNA ref. Phytozome 12:   scaffold_10 (31500003..31500826)
Protein sequence: EgrPrx[P]159
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   240
PWM (Da):   %s   25556.51  
PI (pH):   %s   4.39
Sequence
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Send to Peroxiscan
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QGCNASVLLD GSASEPSEQD TPPNRNLRCT ALQIxDLCDL VEKKCGRVVS CADITTIAAH DSIFLSGRPE YDVPLGRRDG LAFASVNKTT ENLPSPTQSA SQILAALAKK SFDTTVELGH  CGSFTNRLYP TPDPTMEKSF ARAxxxxCPT TNSTNTTVLD IQSPNWFTSD QDQYEDPTTR DIVTSFAKDL ELFFERFVLA MTKMGQLGLL TGTKGESPLL GQEFLEMLFP DDPKYLCPSK 

Retrieve as FASTA  
Remarks Pseudogene from genomic (first exon and 3'end are missing, frame shift). No prediction from Phytozome. No EST. join(31500003..31500196,31500309..31500826).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CAGGGATGCA ATGCTTCGGT GTTGCTGGAT GGATCAGCGA GTGAACCGAG CGAGCAGGAC ACCCCACCAA ATCGAAACTT GAGATGCACA GCGCTCCAAA TCATnGACCT GTGCGACCTC  GTGGAGAAGA AATGTGGTCG GGTAGTCTCT TGTGCTGACA TCACCACCAT CGCCGCTCAC GATTCCATTT TCTTGGTAAA CCCCCCTCAG CCTGTTTTGA TTATAAGCTT TATGTTCTTT  CAAGTTGGAT TTCTTTATCG GGGATTAATT GTAAATAATG TGAGCATGCA TAATATACCG TGTGCAGTCG GGCAGACCTG AGTATGACGT GCCATTGGGA AGGCGGGACG GACTCGCTTT  TGCGTCTGTA AACAAGACCA CAGAGAATTT ACCTTCACCA ACTCAGAGCG CTAGCCAAAT TCTCGCTGCC CTAGCCAAGA AAAGCTTCGA CACCACCGTC GAGCTTGGGC ACTGCGGCAG  TTTCACCAAC CGGCTCTACC CGACCCCAGA CCCCACCATG GAGAAAAGCT TCGCCCGTGC ATGnnnnnnn nnnTGCCCCA CTACAAACTC CACGAACACC ACAGTCCTGG ACATCCAATC  GCCCAACTGG TTCACGTCGG ACCAAGATCA ATATGAGGAC CCCACAACGA GGGACATCGT TACTAGCTTT GCCAAGGACC TGGAATTGTT CTTCGAGAGG TTTGTTCTCG CTATGACCAA 
GATGGGGCAG CTTGGCCTGT TGACTGGGAC GAAAGGAGAA AGCCCGCTGC TCGGTCAGGA ATTCCTAGAA ATGCTTTTTC CTGATGACCC CAAATATTTA TGTCCTTCTA AATAA 

Retrieve as FASTA  
CDS
Send to BLAST
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CAGGGATGCA ATGCTTCGGT GTTGCTGGAT GGATCAGCGA GTGAACCGAG CGAGCAGGAC ACCCCACCAA ATCGAAACTT GAGATGCACA GCGCTCCAAA TCATnGACCT GTGCGACCTC  GTGGAGAAGA AATGTGGTCG GGTAGTCTCT TGTGCTGACA TCACCACCAT CGCCGCTCAC GATTCCATTT TCTTGTCGGG CAGACCTGAG TATGACGTGC CATTGGGAAG GCGGGACGGA  CTCGCTTTTG CGTCTGTAAA CAAGACCACA GAGAATTTAC CTTCACCAAC TCAGAGCGCT AGCCAAATTC TCGCTGCCCT AGCCAAGAAA AGCTTCGACA CCACCGTCGA GCTTGGGCAC  TGCGGCAGTT TCACCAACCG GCTCTACCCG ACCCCAGACC CCACCATGGA GAAAAGCTTC GCCCGTGCAT Gnnnnnnnnn nTGCCCCACT ACAAACTCCA CGAACACCAC AGTCCTGGAC  ATCCAATCGC CCAACTGGTT CACGTCGGAC CAAGATCAAT ATGAGGACCC CACAACGAGG GACATCGTTA CTAGCTTTGC CAAGGACCTG GAATTGTTCT TCGAGAGGTT TGTTCTCGCT  ATGACCAAGA TGGGGCAGCT TGGCCTGTTG ACTGGGACGA AAGGAGAAAG CCCGCTGCTC GGTCAGGAAT TCCTAGAAAT GCTTTTTCCT GATGACCCCA AATATTTATG TCCTTCTAAA 
TAA 

Retrieve as FASTA