Entry information : EgrPrx[P]27
Entry ID 8161
Creation 2011-03-01 (Christophe Dunand)
Last sequence changes 2012-02-28 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-21 (Christophe Dunand)
Peroxidase information: EgrPrx[P]27
Name EgrPrx[P]27
Class Class III peroxidase     [Orthogroup: Prx012]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]27
start..stop
S start..stop
EguPrx[P]27 618 0 1..320 1..320
EgrPrx[P]30 524 0 1..320 1..325
EglPrx[P]30 521 0 1..320 1..323
EguPrx[P]30 410 3e-146 72..320 2..250
Literature and cross-references EgrPrx[P]27
DNA ref. Phytozome 12:   scaffold_1 (11087618..11088779)
Protein sequence: EgrPrx[P]27
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   318 (295)
PWM (Da):   %s   34909.92 (32411.5) Transmb domain:   %s   i7-26o
PI (pH):   %s   8.4 (8.21) Peptide Signal:   %s   cut: 24 range:24-318
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAPVRFNLVH AFILLTLATT AFAIMLRAEL TPAFYNSLCP QMxVVEAAVQ EEPRMGASLL RLHFHECFVN GCDASILLDS MPSFASEKFA IPNNNSVRGF EVINWIKATV NEARGGPVVS  CADILAIAA* DSVIALGGLW WKVRLRRRDS TVASKDEAQA SLPSPFSNIS NITKSFIN*S LDINDLVVLS GAHTLGYARC TIFRGRIYSD TNIDRxFAHS LQLFCPPFPI NESDPRLAAL 
DQTPAVFDTL YYKNLLQQKG LLHSDQALLN NRLAAKLVKS YSEEGERFQR EFTKSMVKMG NIKPLTGERG QGRCDCRRAN 

Retrieve as FASTA  
Remarks Pseudogene from genomic (stop codon in frame and frame shift in exon 1 and after VALS). No prediction from Phytozome.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCCAG TTAGATTCAA TCTTGTCCAT GCATTTATCT TGTTAACTCT CGCGACCACA GCTTTCGCCA TTATGCTCCG TGCCGAGCTC ACACCTGCTT TCTACAATTC ACTTTGTCCT  CAAATGGnnG TGGTCGAGGC CGCTGTCCAG GAAGAGCCAC GCATGGGCGC TTCTTTACTC CGTCTGCACT TCCACGAGTG CTTTGTCAAT GTACTAAGAT GTCTATGCGT ACTTTTTGCA  CACCTTTTTA TTTGCTCTTA TTATGTGCAT GCTTAATGAG TTCAGGGATA ATTGATAATG CAGGGATGCG ACGCTTCAAT TCTTTTGGAC TCTATGCCTT CCTTTGCTAG CGAAAAGTTT  GCCATTCCTA ATAACAATTC AGTCAGAGGA TTCGAAGTAA TCAACTGGAT CAAGGCAACA GTTAATGAAG CTCGTGGAGG CCCTGTGGTC TCTTGTGCAG ACATCTTGGC CATCGCTGCC  TGAGACTCTG TCATAGCGGT ACGTATTAAT TACTCGCATT ATCATCCAAT TTCTAAAGGA TGGCCTAAAT ACTACAGATG AACAAGAGAC AACAAATATG TGGGAATAAT TTGTTATTAT  TCCAATGCAG CTAGGAGGAC TATGGTGGAA GGTTCGGCTC AGAAGAAGAG ACTCAACCGT GGCAAGCAAG GACGAGGCTC AAGCATCTCT TCCTTCGCCT TTTAGCAATA TCTCTAACAT  AACCAAGTCC TTCATAAATT AAAGCCTCGA CATTAATGAC TTGGTCGTCC TGTCCGGTGC ACACACACTA GGATATGCAC GGTGCACAAT ATTCAGAGGA CGGATCTACA GTGACACAAA  CATTGACCGA CCnTTTGCAC ACAGCCTTCA GTTGTTTTGC CCACCCTTTC CAATCAACGA ATCCGACCCT AGGCTCGCTG CTTTGGATCA AACTCCTGCT GTCTTTGATA CTTTGTACTA  TAAAAACTTG TTACAGCAAA AAGGGCTTCT CCATTCTGAT CAGGCGCTTC TCAACAATCG CCTAGCTGCC AAGCTGGTCA AGTCTTACAG TGAAGAAGGC GAGAGGTTTC AGAGAGAATT 
CACGAAATCC ATGGTTAAGA TGGGAAACAT AAAGCCTTTG ACTGGTGAAC GTGGCCAAGG TCGATGCGAC TGTAGACGAG CGAAC 

Retrieve as FASTA