Entry information : EgrPrx[P]30
Entry ID 8172
Creation 2011-03-02 (Christophe Dunand)
Last sequence changes 2012-02-28 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-21 (Christophe Dunand)
Peroxidase information: EgrPrx[P]30
Name EgrPrx[P]30
Class Class III peroxidase     [Orthogroup: Prx012]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]30
start..stop
S start..stop
EglPrx[P]30 649 0 1..325 1..323
EgrPrx[P]27 524 0 1..325 1..320
EguPrx[P]27 508 0 1..325 1..320
EguPrx[P]30 486 3e-176 76..325 1..250
Literature and cross-references EgrPrx[P]30
DNA ref. Phytozome 12:   scaffold_1 (11170103..11172763)
Protein sequence: EgrPrx[P]30
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (301)
PWM (Da):   %s   35409.94 (32945.7)  
PI (pH):   %s   7.9 (7.34) Peptide Signal:   %s   cut: 23 range:23-323
Sequence
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Send to Peroxiscan
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MAPVRFNRVH AFLC*LFATT AFAITPHAEL TPAFYDSLCT RASPAIKWVV EAAIQEEPRM GASLLRLHFH DCFVNECDAS ILLDSTPSFA SEKFAIPNNN SVRGFEVIDR IKAAVDEACR  GPVVSCADSL AVAA*DCRSx xGGPWWKVRL RRKDSTVASK DKAQASLPSP FSNISNITKS FINQSLDINN LVVLSGAHTP GYARCTIFRG RIYSDTNIEP TFAQSLRLFC PPLPSNESDP 
RLAALDQTSA VFDTLYYKNL LQQEGLLHSD QVLLNNPLAA ELVKSYSEEG ERFQRDSTKS MVKMINIKPL TGERGQVQRD CRRAN 

Retrieve as FASTA  
Remarks Pseudogene from genomic (Stop codons in frame, and missing residue => sequence contains "n"). No prediction from Phytozome. No EST.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCCAG TTAGATTCAA TCGTGTCCAT GCATTTCTCT GTTAACTCTT TGCGACCACA GCTTTCGCCA TTACACCCCA TGCCGAGCTC ACACCTGCTT TCTACGACTC GCTTTGTACT  CGAGCTTCAC CAGCCATCAA ATGGGTGGTC GAGGCCGCTA TCCAAGAAGA GCCACGCATG GGTGCTTCTT TACTCCGTCT GCACTTCCAC GACTGCTTTG TCAATGTACT AAGATGTCTA  TGGGCAGAAG AACAGCACAA GTGCCATAAC TTGGCACGCC GGGACACTTA AGTGCCATAA CTTCCAAACG GTACACTTAA GTGCCACTTT TTTTTTCGAG TGGGACACTT AAGTGCCACC  TCCGGCGACC CTTGCCGGAA ATCCTACGTG GCAATATTTT ATTATTATTT TTTGCCTACG TGGCTCGCCG GAGCTCCAAA TCAGCATAAA AATTAACAAA AAAAATTTTT AAAAAAGAAG  ATAAAAGATC AATCAATTTG ACAATGACTC ATATTTTGAG ATTTTAATAA GAAAATTTTA AAAAATTTAA AAATTTAAGA ATTTAAAAAA AAGCAGGGGG GGGATTTTGA ATTATTCCAA  CGCTCCCCCT CACGCTCAGT CTAGTCTTTT TGCCTAGTAC TAAGACATGA AAATATTTAA TTGGAAAGGC AAACGGGGAT CTCGAACAAC TTGAACTTAG GACCTCCAGC TCTGAGATCA  TATGAGATTT TGTGAGATCA CTGCCTACTG TCCTAAAAGC TTAAGCTGTC AGATGAATGT GTTGCTTTAT ATTTCACTAT TCCAGGATAT ACCTTCCTTG CAATACCTCA CTTTGAAGTT  ACATCTTGTA ATGTATGTGA CAATTTGTCT ATGATTGTAG AGAnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnCTCGTCA CGAACACATA CCTCTGCTGG TAGGACACAA TCTGCCGGTC TTACAATTTT TCCACTTCCC CTAGCGCATG CTTTTATTCC TTATCCCCAA  AAAGATTCAC AAGCGGAGGG TCAGCGAGGG CCCGCGAGCC CTCGCCCAGA TCTAGGGCGA GGGTCACGGC CCTCGCCGCA CTTCGGCGAG GGCTCGCAGC CCTCGCCGTC GATCGGCCGG  GGACCGGCGA CCCCGGCCGA CCCTCCCCCC TCCGTCGCCA GCCCTTCCCG GCGACGGCGG GGAGGCGGCG ACAGCGGGGA GGCGGCGGCA GCGAGGGCTC AGCCCTCAGC CGCCCGTTCG  ACCTCCCCCA CCCTTTTTTT TTTAATTTTT CATTTTCTTA ATTTTTTAAA AATTTTAAAT TTTTCTTAAT TTTTTAAAAA TTTTAAATTT TTCTTAATTT TTTAAATTTT TTGAATACTT  TATAATTTAA TTAATTTTTA TATTATTATT TACACGTAGG CACAAAACGG CGTCGTTTTT GCGTTTTCTC TGCCACGTCA GCGTGCAAAA CGACGCCGTT TTGGACTAAA CTCGCCGGAA  AATTGCCACG TCAGCCATTT GGCCGGATTT TCGCCGGAGT GGCACTTAAG TGTCCCATTT TACTCCGATG ATGGCACTTA AGTGTACCAT TTTAAAGTTA TGGCACTTAA GTGTCCCGGC  GTGCCAAGTT ATGGCACTCC AGGTGTCCTC ACCTCGATGT CTATGCTTAC TTTTTGCACA CCTTTTTATT TGCTTTCATT ATGTGCATGC TTATTGAGTT TCGGGATAAT TGATAATGCA  GGAATGCGAC GCTTCAATTC TTTTGGACTC TACGCCTTCC TTTGCCAGCG AGAAGTTTGC CATTCCTAAT AACAATTCAG TTAGAGGATT CGAAGTAATC GACCGGATCA AGGCAGCAGT  TGATGAAGCT TGTAGAGGCC CTGTGGTCTC CTGTGCAGAC AGCTTGGCCG TTGCTGCCTG AGACTGTCGT AGCnnnnnnG GTACGTATTA ATTACTCGCA TTATCATCCA ATTTCTAAAG  GATGGCCTAA ATACTACAGA TGAACAAGAG ACATCAAATA TGTTGGAAAA ATTTGTTAAT ATTCCAATGC GGCCAGGAGG ACCATGGTGG AAGGTTCGGC TCAGAAGAAA AGACTCAACC  GTGGCAAGCA AGGACAAGGC TCAAGCGTCT CTTCCTTCGC CTTTTAGCAA TATCTCTAAC ATAACCAAGT CCTTCATAAA TCAAAGCCTC GACATTAATA ACTTGGTCGT CCTGTCCGGT  GCACACACAC CAGGATATGC ACGGTGCACA ATATTCAGGG GAAGGATCTA CAGTGACACA AACATTGAGC CAACCTTCGC ACAAAGCCTT CGGTTGTTTT GCCCGCCCCT TCCAAGCAAC  GAATCCGACC CTAGGCTCGC TGCTTTGGAT CAAACTTCTG CTGTCTTTGA TACTTTGTAC TATAAAAACT TGTTACAGCA AGAAGGGCTT CTCCATTCCG ATCAGGTGCT TCTCAACAAT  CCCCTAGCTG CCGAGCTGGT CAAGTCTTAC AGCGAAGAAG GCGAGAGGTT TCAGAGAGAT TCCACAAAAT CCATGGTTAA GATGATAAAT ATAAAGCCTT TGACTGGTGA ACGTGGCCAA 
GTTCAACGCG ACTGTAGACG AGCGAAC 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCCAG TTAGATTCAA TCGTGTCCAT GCATTTCTCT GTTAACTCTT TGCGACCACA GCTTTCGCCA TTACACCCCA TGCCGAGCTC ACACCTGCTT TCTACGACTC GCTTTGTACT  CGAGCTTCAC CAGCCATCAA ATGGGTGGTC GAGGCCGCTA TCCAAGAAGA GCCACGCATG GGTGCTTCTT TACTCCGTCT GCACTTCCAC GACTGCTTTG TCAATGAATG CGACGCTTCA  ATTCTTTTGG ACTCTACGCC TTCCTTTGCC AGCGAGAAGT TTGCCATTCC TAATAACAAT TCAGTTAGAG GATTCGAAGT AATCGACCGG ATCAAGGCAG CAGTTGATGA AGCTTGTAGA  GGCCCTGTGG TCTCCTGTGC AGACAGCTTG GCCGTTGCTG CCTGAGACTG TCGTAGCnnn nnnGGTGGAC CATGGTGGAA GGTTCGGCTC AGAAGAAAAG ACTCAACCGT GGCAAGCAAG  GACAAGGCTC AAGCGTCTCT TCCTTCGCCT TTTAGCAATA TCTCTAACAT AACCAAGTCC TTCATAAATC AAAGCCTCGA CATTAATAAC TTGGTCGTCC TGTCCGGTGC ACACACACCA  GGATATGCAC GGTGCACAAT ATTCAGGGGA AGGATCTACA GTGACACAAA CATTGAGCCA ACCTTCGCAC AAAGCCTTCG GTTGTTTTGC CCGCCCCTTC CAAGCAACGA ATCCGACCCT  AGGCTCGCTG CTTTGGATCA AACTTCTGCT GTCTTTGATA CTTTGTACTA TAAAAACTTG TTACAGCAAG AAGGGCTTCT CCATTCCGAT CAGGTGCTTC TCAACAATCC CCTAGCTGCC  GAGCTGGTCA AGTCTTACAG CGAAGAAGGC GAGAGGTTTC AGAGAGATTC CACAAAATCC ATGGTTAAGA TGATAAATAT AAAGCCTTTG ACTGGTGAAC GTGGCCAAGT TCAACGCGAC 
TGTAGACGAG CGAAC 

Retrieve as FASTA