Entry information : AtPrx06 (At1g24110 / PER6)
Entry ID 82
Creation 2006-02-02 (Filippo Passardi)
Last sequence changes 2015-06-02 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-09 (Achraf Jemmat)
Peroxidase information: AtPrx06 (At1g24110 / PER6)
Name (synonym) AtPrx06 (At1g24110 / PER6)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis thaliana    [TaxId: 3702 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtPrx06
start..stop
S start..stop
AlyPrx06 660 0 1..326 1..326
AhalPrx53 655 0 1..326 1..326
BstrPrx79 644 0 1..326 1..326
TsPrx06 598 0 1..326 1..328
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 8527838..8528818 981  
join(8527838..8528818)


exon

Literature and cross-references AtPrx06 (At1g24110 / PER6)
Protein ref. UniProtKB:   O48677
DNA ref. Phytozome 12:   Chr1 (8527838..8528818)
mRNA ref. GenBank:   NM_102257
Cluster/Prediction ref. Phytozome Gene 12:   19653230 UniGene:   At.51747
Omic ref. AtProteome:   At1g24110 ATTED-II:   At1g24110 e-FP Browser:   At1g24110 ePlant:   At1g24110 Genevestigator:   At1g24110 TAIR:   At1g24110
Protein sequence: AtPrx06 (At1g24110 / PER6)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (306)
PWM (Da):   %s   36172.97 (34021.8)  
PI (pH):   %s   6.5 (6.25) Peptide Signal:   %s   cut: 21 range:21-326
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKSFGLCLFI LVSSPCLLQA NLSSDYYTKT CPEFEETLVQ IVTDKQIAAP TTAVGTLRLF FHDCMVDGCD ASILVASTPR KTSERDADIN RSLPGDAFDV ITRIKTAVEL KCPNIVSCSD  ILVGATRSLI SMVGGPRVNV KFGRKDSLVS DMNRVEGKLA RPNMTMDHII SIFESSGLTV QEMVALVGAH TIGFSHCKEF ASRIFNKSDQ NGPVEMNPKY AAELRKLCAN YTNDEQMSAF 
NDVFTPGKFD NMYYKNLKHG YGLLQSDHAI AFDNRTRSLV DLYAEDETAF FDAFAKAMEK VSEKNVKTGK LGEVRRRCDQ YNDYKG 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, no intron) and 2 cDNA. No EST.
Promoter
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CAACCCTTCC AACGTAGAGT TCCAACCACA ATGAGTCAAA AAGCAACCTA TCGATTCATG AGCTAAAACC TCAAGCTGGT TACACCAAGA AACCAACAAG GCTCTATCTT TAGTCGATTC  CACAAACCCT TCAGGCAATT TCGCTATATG AGCTTCTTTA ATCACCCACA AGAAGTTCAA ATCCGATTCT TGTAGCGCAA TAGCTACCTC TGCAAGTTGC TTCTCAAAGA GAATCCCAAA  CGAACCAAAC GAAACAAATG CTACTGACTG AGCCTGCTTA GTCTCAAGCC ACTCCATACA CTCCTTCGAT ATCGGTTTCA ACAGACTCGC ACCATAGTCT TTATCATCTT CCATCCGATC  ATCAAGATAA GCCGATGGAA TCATCGGTCC GATCAACGTC GCCTTCATTG CATCAGACTC ACCATTTTCA CAATCCTAAT CAAAACAACA GTTCTAATTT CAATTCAACA ATGTAACATA  AAGTTTCAAA CTTTATAGTA GAATCAAAAC TCTTACTTGT GTTTCTTCTA ACCCTTCAAA GCCATTAACG AATAACCAAT CAGCATTTTC ATGGTTAGGA AACTGATTCA GAAGAACTCT  GCCATGCTCA GGATGAGTCA ACCAATGACG TCCCACAAAC GAAGGTAACT CATCGTAGCT CAAAGACGGT AAGCCACGGA TACGAAACGG CGCCGAATTA GGATCAGCGG GAAGAGGAAA  GTCACCGTTA GAGAATTTAC GCAACACAGA ACAAACAGTG AGATTATTAG TGAAGAAAGA AGCAGCTGAA AGTTCCATAG ATCTAGCAAC TTCAAGTCCC CAAGGAAGAA ACGAATCGTA  GATTAAGCAA TCGATTGGTG AATCTGTGGA TTTGAATTTC TCGATTAGGA GAGTTAGGGT TTCGGATCCG TTGAGCTTGA AGGATTCTGA GTAAGTATCG ACGCTGAAAC CGGGGATACC  TATGGGGATG AAATCGAATC CATCGGAGAT TGGTTCGACG GAGAGTGATG GTGTTGTGAT TGAGGAGGCG GTGTAGGTAG TGGTGGCGAT TGTGACTTTG ACGTTTTTGG AGACTAGACG  TTTAGCGAAT TGAACCATTG GGTTTAGGTG GCCTTGAACT GGGTATGGTA AGATTACGAC GTGGCCTTTC ACTTTGGGAG TTGTTTCCGC CATTGTTTTA GCTCAACGAA GCAGAGCTTT  GGGTTGATTT TTTTTTTTTT TTCAATTGAA GATGATAAAG TGTTGAAGAC ATTTGTTATT TGATTTTGGT TTATTATATA GTCAGATCTA TTATGTCGCG TTGTTCACGT TTTGCGTTGG  TGGCACCAAC CTCAATGTTG TTGGATAGTA TTATTCTCTT TTTAGAAGTT TTCTCAATTG AAAAAAGTGT AACTAAAATA CTAAAAAAAC AATGAAATAA CAGAACATAA TAATGATATA  AAAATTAGTA AAGAACAATG GAATGTAGTA TATCAGCACG AAATTATGAA AATTTTGAAT TATTGTGAAA TAACTATAAC CAATTTATAG GAAAGTGATG TAAAAATAAA TAACTAGTTT  TTAGGTTTTT GTTTAGAGAT TATGTCGAAA TAATTGTGAT TTGTAGTATA TGAAAGATTG GAAAGTCACA CCTCTTTGAC GTTAGTAAAT ACAGTGAGTG TGTGTGGCAA ATCGATTAAA  CAAAATTTAT ACATATGACA TTTTTGTTAG GAGCAACATT TTGATTATTT TTATCTCCTA GTGTTTCTAA TAATTGTGGA GACCAAAAAA GGGTTTTACA ATTTGGTAAA ATATCGTTTT  CTGTTTCTCC TAAAAACTCT CAATTTAGAT TTTTCTAAAC AAAAACACCT TCGTTTTAGA ATTAACAACG ACACAAACAG CTAAAAGATA ACACACACGC CCACAACAAT AGAAGAGAAA 
AAATAGAGAT CGAAAATCAA CCAATATCAT TTGAAATCAG GAGAAAATAA TATTAATTAG ATTTTTCCCT CTTTTTTTCA 

Retrieve as FASTA  
Terminator +
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Send to cis Analysis
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATTAGGATTA CCCCTTTTAA CACACATTCA AAATTTATTT GGTAGTGACT AGTGAATTTG GTCTTGTGAT ATTGAGTTGC TAATATATTG AAATTGAAAA TGTAGCAATC ATGATTCATG  CCTTCGGGTG GAAAAAAAAA ATCTCTCGTG AAATTTTTTG TGCCATCAAT ATGTGTTATC TAAATTTTTG CATGTGTCAA ATTGAATAAT CTGTTACAAA ATTGGATATC ACAAAATTTC  CATACTTGCG ATCCATTTGT CATATGTGAT CTCGGGTTCA ATAGGGCACA ATATGTTTAA GAGAACTTTG ACAGATAACA ATTATCAAAA TAAAATTGTT GACTAATACT AATGATAAGT  TGAAGGAGAA AAATAGCAAA AGATTTACAG ATACACCGAT CCCTAAGGTA AGGGAGAAAA ATAATGGATA AGAATCTTTT TCTTTGATAA AAGTGATGAA GAAACTAACA AGGTTTTTTC  TTGTCCAATT TCAAATGTAA ATTGAACCAT TTGCTCTTCT TCTTTAGTGT CTCGGACTTA TCACAAGTAC TTGGTTTCTT GTTCTTCTGT CTGCTGCTTT CTTCCTCTTC TTCTTCCTCT  TCCTCTTCCT CTTCTTCCTG TTCAGTTGGA GCAGGCGCCT TAGCCGCCGC CTTCTTGAAT GAGCTCTTTC TCATCCTGTT CTTGCTCGAG CTCCGCTTCA TCAATGGAAT CGTCGTGTAT  GCTGAGTGAA TTTCATTTCT CTGCTTTAAG AGCTCATCGA TCTGCAAAAA GACCATAAGA TAATCAGACT AAGCTAACCA TTTCAGAAAC TTACACATAG AATCTGGTCT AATTTACTCA  GTCATGACAC ATCTTCTCTT CGTTTTCTGT GAATGGTGGT TTGAAATTTA TAAACTTTCA TGAATAAAAG ACTAACCGAT TGCATTTCTT GAGCGTATCG ACTGGTCATA TCGGTGAACT 
GCACAAGTAC TTCCCTGTAC TCTGTCTCAA ACTTTGCCAG 

Retrieve as FASTA  
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAATCTT TTGGTTTATG TCTGTTTATT CTCGTATCTT CTCCATGTCT CCTTCAAGCC AATCTCTCGT CTGATTATTA CACCAAAACA TGTCCTGAAT TCGAGGAAAC ACTCGTACAA  ATCGTCACCG ATAAACAAAT TGCAGCTCCA ACAACAGCTG TCGGAACACT CCGTCTCTTT TTCCACGATT GCATGGTTGA TGGCTGCGAC GCCTCAATCC TCGTTGCTTC TACTCCACGT  AAAACCTCCG AACGTGACGC CGATATCAAC CGTTCTCTTC CTGGAGACGC ATTCGACGTA ATCACACGTA TCAAAACCGC CGTCGAGCTA AAATGTCCAA ACATTGTTTC TTGCTCCGAT  ATCCTCGTTG GTGCAACACG TAGTTTAATC TCAATGGTCG GAGGTCCGAG AGTTAACGTT AAGTTCGGTC GGAAAGATAG TCTTGTCTCT GATATGAATC GTGTTGAAGG AAAACTAGCT  CGACCTAACA TGACTATGGA TCATATCATT TCTATTTTCG AGTCTAGTGG TCTGACCGTT CAAGAAATGG TTGCTCTTGT TGGTGCTCAC ACCATTGGTT TCTCTCATTG CAAAGAGTTC  GCGAGTCGGA TCTTTAACAA GTCTGATCAA AATGGTCCGG TGGAGATGAA TCCGAAATAC GCGGCGGAGC TGAGGAAGTT GTGTGCGAAT TACACCAATG ATGAACAGAT GTCTGCGTTT  AATGACGTTT TTACTCCAGG GAAATTTGAT AATATGTATT ACAAGAATTT GAAGCACGGT TACGGGTTGC TCCAGTCCGA TCACGCGATT GCGTTTGACA ACAGGACGCG CTCGCTGGTG  GATCTTTACG CGGAGGACGA AACGGCGTTC TTTGACGCGT TTGCGAAGGC TATGGAGAAA GTTAGTGAGA AGAATGTGAA GACGGGGAAG CTTGGAGAAG TAAGAAGGCG GTGTGATCAA 
TACAATGACT ACAAGGGATA A 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAATCTT TTGGTTTATG TCTGTTTATT CTCGTATCTT CTCCATGTCT CCTTCAAGCC AATCTCTCGT CTGATTATTA CACCAAAACA TGTCCTGAAT TCGAGGAAAC ACTCGTACAA  ATCGTCACCG ATAAACAAAT TGCAGCTCCA ACAACAGCTG TCGGAACACT CCGTCTCTTT TTCCACGATT GCATGGTTGA TGGCTGCGAC GCCTCAATCC TCGTTGCTTC TACTCCACGT  AAAACCTCCG AACGTGACGC CGATATCAAC CGTTCTCTTC CTGGAGACGC ATTCGACGTA ATCACACGTA TCAAAACCGC CGTCGAGCTA AAATGTCCAA ACATTGTTTC TTGCTCCGAT  ATCCTCGTTG GTGCAACACG TAGTTTAATC TCAATGGTCG GAGGTCCGAG AGTTAACGTT AAGTTCGGTC GGAAAGATAG TCTTGTCTCT GATATGAATC GTGTTGAAGG AAAACTAGCT  CGACCTAACA TGACTATGGA TCATATCATT TCTATTTTCG AGTCTAGTGG TCTGACCGTT CAAGAAATGG TTGCTCTTGT TGGTGCTCAC ACCATTGGTT TCTCTCATTG CAAAGAGTTC  GCGAGTCGGA TCTTTAACAA GTCTGATCAA AATGGTCCGG TGGAGATGAA TCCGAAATAC GCGGCGGAGC TGAGGAAGTT GTGTGCGAAT TACACCAATG ATGAACAGAT GTCTGCGTTT  AATGACGTTT TTACTCCAGG GAAATTTGAT AATATGTATT ACAAGAATTT GAAGCACGGT TACGGGTTGC TCCAGTCCGA TCACGCGATT GCGTTTGACA ACAGGACGCG CTCGCTGGTG  GATCTTTACG CGGAGGACGA AACGGCGTTC TTTGACGCGT TTGCGAAGGC TATGGAGAAA GTTAGTGAGA AGAATGTGAA GACGGGGAAG CTTGGAGAAG TAAGAAGGCG GTGTGATCAA 
TACAATGACT ACAAGGGATA A 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAATCTT TTGGTTTATG TCTGTTTATT CTCGTATCTT CTCCATGTCT CCTTCAAGCC AATCTCTCGT CTGATTATTA CACCAAAACA TGTCCTGAAT TCGAGGAAAC ACTCGTACAA  ATCGTCACCG ATAAACAAAT TGCAGCTCCA ACAACAGCTG TCGGAACACT CCGTCTCTTT TTCCACGATT GCATGGTTGA TGGCTGCGAC GCCTCAATCC TCGTTGCTTC TACTCCACGT  AAAACCTCCG AACGTGACGC CGATATCAAC CGTTCTCTTC CTGGAGACGC ATTCGACGTA ATCACACGTA TCAAAACCGC CGTCGAGCTA AAATGTCCAA ACATTGTTTC TTGCTCCGAT  ATCCTCGTTG GTGCAACACG TAGTTTAATC TCAATGGTCG GAGGTCCGAG AGTTAACGTT AAGTTCGGTC GGAAAGATAG TCTTGTCTCT GATATGAATC GTGTTGAAGG AAAACTAGCT  CGACCTAACA TGACTATGGA TCATATCATT TCTATTTTCG AGTCTAGTGG TCTGACCGTT CAAGAAATGG TTGCTCTTGT TGGTGCTCAC ACCATTGGTT TCTCTCATTG CAAAGAGTTC  GCGAGTCGGA TCTTTAACAA GTCTGATCAA AATGGTCCGG TGGAGATGAA TCCGAAATAC GCGGCGGAGC TGAGGAAGTT GTGTGCGAAT TACACCAATG ATGAACAGAT GTCTGCGTTT  AATGACGTTT TTACTCCAGG GAAATTTGAT AATATGTATT ACAAGAATTT GAAGCACGGT TACGGGTTGC TCCAGTCCGA TCACGCGATT GCGTTTGACA ACAGGACGCG CTCGCTGGTG  GATCTTTACG CGGAGGACGA AACGGCGTTC TTTGACGCGT TTGCGAAGGC TATGGAGAAA GTTAGTGAGA AGAATGTGAA GACGGGGAAG CTTGGAGAAG TAAGAAGGCG GTGTGATCAA 
TACAATGACT ACAAGGGATA A 

Retrieve as FASTA