Entry information : NtAPx-R
Entry ID 8209
Creation 2011-04-06 (Christophe Dunand)
Last sequence changes 2011-04-06 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-04-06 (Christophe Dunand)
Peroxidase information: NtAPx-R
Name NtAPx-R
Class Ascorbate peroxidase related    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtAPx-R
start..stop
S start..stop
LeAPx-R 250 5e-85 5..133 198..326
HaAPx-R 238 3e-80 5..131 197..323
HarAPx-R 227 2e-77 5..131 100..226
CroAPx-R01 226 5e-77 5..129 102..226
Literature and cross-references NtAPx-R
Literature Lein,W., Usadel,B., Stitt,M., Reindl,A., Ehrhardt,T., Sonnewald,U. and Boernke,F. Large-scale phenotyping of transgenic tobacco plants (Nicotiana tabacum) to identify essential leaf functions. Plant Biotechnol. J. 6 (3), 246-263 (2008)
EST ref. GenBank:   AM790061.1
Protein sequence: NtAPx-R
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   133
PWM (Da):   %s   14576.2  
PI (pH):   %s   4.62
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
HAAAIDSLVP DPEGKLPEES LDATSLKQCF ERKGFSTQEL VALSGAHTLG SKGFGNPVVF DNAYFKILME KPWLSSAGMT SMVGLPSDRA LVEDDECVRW ISKYAEDQSL FFEDFKNAYT 
KLVDTGATWK RSL 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. Large 3' end is missing. Cultivar="SNN".
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TCATGCGGCC GCTATTGATT CACTGGTGCC TGATCCTGAA GGAAAACTTC CTGAAGAATC ACTTGATGCT ACTAGTTTGA AGCAATGTTT TGAAAGAAAA GGTTTCTCAA CTCAGGAACT  TGTTGCCTTG TCTGGCGCGC ATACTCTAGG AAGTAAAGGA TTTGGGAATC CAGTTGTCTT TGATAATGCA TACTTCAAGA TACTCATGGA GAAGCCATGG TTATCCTCAG CTGGCATGAC  TAGTATGGTT GGCCTTCCTT CTGATAGGGC ACTTGTTGAA GATGATGAAT GTGTAAGATG GATCTCAAAG TATGCTGAGG ATCAGAGTTT ATTTTTTGAA GATTTCAAGA ATGCCTATAC  CAAACTTGTT GACACTGGTG CAACTTGGAA GAGATCATTG TAGTCCTCAA GATTAATCAG CAATACCTCG TCATAGCCAG TGAGTTGTTT TGGTATAAAC AAGATTCCAC GACACAACAA 
CAAATGCAGT CAATGCCAAT TT 

Retrieve as FASTA