Entry information : NtPrx35-1B (NtPrx35b)
Entry ID 8234
Creation 2011-04-08 (Christophe Dunand)
Last sequence changes 2011-04-26 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-04-26 (Christophe Dunand)
Peroxidase information: NtPrx35-1B (NtPrx35b)
Name (synonym) NtPrx35-1B (NtPrx35b)
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx35-1B
start..stop
S start..stop
NtPrx35-1A 627 0 1..331 1..330
LePrx68 619 0 1..331 1..330
StPrx12 615 0 1..331 1..330
StPrx10 610 0 1..331 1..330
Literature and cross-references NtPrx35-1B (NtPrx35b)
EST ref. GenBank:   FG147257.1 [5' end]   FG150769.1 [3' end]
Protein sequence: NtPrx35-1B (NtPrx35b)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (309)
PWM (Da):   %s   36055.23 (33633.0)  
PI (pH):   %s   9.54 (9.66) Peptide Signal:   %s   cut: 23 range:23-331
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAQSMSFFFL IGLLAFAPLC FSTKTSGGSL YPQYYYRSCP KAQEIVKSVV AKAVAKEARM AASLLRLHFH DCFVKGCDAS LLLDSSRGIV TEKRSNPNRN SARGFEVIDE IKSALEKECP  QTVSCADILA LAARDSTVLA GGPNWEVPLG RRDSRGASLS GSNNDIPAPN NTFNTILTKF KRQGLDLVDL VALSGSHTIG NSRCTSFSQR LYNQSGNSQP DSTLDQSYAA QLRNRCPKSG 
GDQNLFFLDF VSPTKFDNSY FKNLLASKGL LNSDQVLTTK SQASLALVKQ YAENNELFFE HFAxKSMVKM GNISPLTGSR GEIRKNCRKM N 

Retrieve as FASTA  
Remarks Complete sequence from 3 ESTs. Frame shift and bad sequence in 3' of FG147257.1 => correction made with AM836058.1.
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GAATTCCCCG GGATTTCAAC TTCTTCAATA CCAAGTTCTT AGAACTTAAC TTCAAGATGG CTCAGTCCAT GAGCTTCTTC TTTCTCATAG GTCTCCTTGC TTTTGCACCA CTTTGTTTCT  CTACTAAGAC AAGTGGTGGT TCCCTATACC CACAATATTA TTACCGATCA TGCCCAAAAG CACAAGAAAT TGTCAAGTCT GTTGTTGCCA AGGCTGTTGC CAAAGAAGCT CGAATGGCTG  CTTCGTTGCT GAGGCTCCAT TTCCACGACT GCTTTGTCAA GGGTTGCGAT GCGTCTTTGC TTCTGGACAG CAGCAGAGGT ATAGTAACAG AAAAAAGATC AAACCCCAAC AGGAATTCAG  CTCGTGGATT TGAAGTCATT GATGAGATTA AATCTGCACT GGAGAAGGAA TGCCCTCAAA CTGTCTCTTG TGCTGATATA TTGGCACTTG CTGCAAGAGA TTCTACTGTA TTAGCTGGTG  GACCAAACTG GGAAGTTCCC TTGGGAAGAA GAGACTCGAG AGGTGCCAGT TTAAGTGGCT CCAACAATGA CATTCCTGCT CCAAACAACA CATTTAATAC CATTCTCACT AAATTCAAGA  GACAAGGACT TGATCTTGTT GACCTTGTTG CTTTATCCGG GAGCCACACT ATTGGAAATT CAAGATGTAC CAGCTTCAGG CAAAGGCTCT ACAACCAATC AGGAAATAGT CAACCAGACT  CAACTCTGGA TCAATCATAT GCTGCCCAAT TGCGCAATAG GTGCCCAAAA TCTGGTGGTG ATCAGAACCT ATTTTTCTTG GACTTCGTCT CTCCCACAAA ATTTGACAAC AGCTATTTCA  AGAACTTGTT GGCTTCAAAG GGCCTCCTGA ACTCGGACCA AGTTCTTACA ACTAAGAGTC AAGCATCATT AGCCTTGGTG AAACAATATG CAGAGAACAA TGAGCTGTTC TTTGAGCACT  TCGCCAAGTC TATGGTTAAG ATGGGGAACA TTTCACCTTT GACAGGTTCC AGGGGAGAGA TCCGCAAAAA CTGCAGGAAG ATGAACTGAT CTTAAAAGAG CTAGCACAAC AAACATAGTC  AATAATTGTC CCTTTATTGT TATGTTGTTA TGTATCTTTT CTCTTGTTTT TTTAAAGAAC ATTCTTCTAG TATTCCTTGA GGATCTCATT GCTTGTGCCG TCCTCATAGA CCGTACTTTT 
GTTGTTCGAG TAGATTGCTT TGTCAACAAC TCGATCAATA GGACC 

Retrieve as FASTA