Entry information : NtPrx42-1B (NtPrx42b)
Entry ID 8242
Creation 2011-04-11 (Christophe Dunand)
Last sequence changes 2011-04-11 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-04-11 (Christophe Dunand)
Peroxidase information: NtPrx42-1B (NtPrx42b)
Name (synonym) NtPrx42-1B (NtPrx42b)
Class Class III peroxidase     [Orthogroup: Prx016]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx42-1B
start..stop
S start..stop
NtPrx42-1A 467 3e-169 1..232 85..316
LePrx03 451 7e-163 1..232 86..317
StPrx35 433 1e-155 1..226 86..313
VvPrx102 380 4e-136 1..232 16..247
Literature and cross-references NtPrx42-1B (NtPrx42b)
EST ref. Galderia Genome:   EB683168.1 [Sequencing error]
Protein sequence: NtPrx42-1B (NtPrx42b)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   232
PWM (Da):   %s   25198.07  
PI (pH):   %s   10.36
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
EKDAPPNGSM HGFYVINGAK RAVEAICPGI VSCADILAFA ARDAVVLSGG PYWEVPKGRK DGRISRASET TLLPKPTFNI SQLQQSFHQR GLSTDDLVAL LGAHTLGFSH CSSFISRIYN 
FNATHDIDPT LRRSFAASLK SICPLKNRAK NAGISNDPSP TTFDNTHYRI ILQKKSLFSS DHALLTAPKT KKLVYKFATS KAAFHKAFAN SMIKMSSLTG GQEVRKDCRV VN 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. Frame shift after QKKS 52 extra t)
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CAGAAAAAGA TGCCCCTCCT AATGGTTCTA TGCACGGATT CTATGTTATT AACGGTGCAA AGAGAGCAGT TGAAGCTATA TGTCCTGGCA TTGTTTCTTG CGCTGATATT CTAGCGTTTG  CTGCAAGAGA TGCAGTCGTG TTATCAGGTG GGCCTTACTG GGAGGTGCCA AAAGGAAGAA AAGATGGGAG AATATCCAGG GCAAGTGAAA CAACACTGCT GCCCAAACCT ACATTCAACA  TTTCTCAACT GCAACAAAGC TTCCATCAGA GAGGTTTATC AACCGATGAT TTGGTGGCTC TTTTAGGTGC GCACACTTTA GGATTTTCCC ATTGCTCATC CTTTATTAGC CGCATATACA  ACTTCAATGC CACACATGAC ATCGATCCTA CACTACGTCG ATCGTTTGCA GCAAGCTTGA AGAGCATATG TCCACTCAAA AACAGGGCTA AGAATGCAGG AATAAGCAAT GATCCTTCTC  CAACGACATT TGATAATACT CATTACAGGA TAATTCTCCA AAAGAAGAGT TGTTCTCTTC AGATCATGCT TTGCTCACTG CTCCAAAAAC AAAGAAGCTA GTTTATAAGT TTGCTACCTC  AAAAGCAGCT TTTCATAAGG CTTTTGCTAA TTCCATGATT AAGATGAGTA GCCTTACAGG TGGTCAAGAA GTTAGAAAAG ATTGCAGGGT AGTAAACTGA TGATTGCTCC ATTGTTAATT  AATTCTACTT AGCAGTTTAA TATCTGTATA ATTGTAATTA GATGATCCAG GAAAATGGGT TGTCTATCAC TTCCTATATT GTCTTAGTTT CATTTTATTG ATTATAGTAC TAGGAAAACT 
TA 

Retrieve as FASTA