Entry information : NtPrx45-1B (NtPrx45b)
Entry ID 8259
Creation 2011-04-13 (Christophe Dunand)
Last sequence changes 2011-04-13 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-04-13 (Christophe Dunand)
Peroxidase information: NtPrx45-1B (NtPrx45b)
Name (synonym) NtPrx45-1B (NtPrx45b)
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx45-1B
start..stop
S start..stop
NtPrx45-1A 270 7e-95 7..147 3..143
LePrx65 243 6e-82 7..147 3..144
PpePrx26 221 1e-73 10..147 7..142
VvPrx47 219 6e-73 24..147 22..145
Literature and cross-references NtPrx45-1B (NtPrx45b)
EST ref. Galderia Genome:   FS398909.1 [5' end]
Protein sequence: NtPrx45-1B (NtPrx45b)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   147 (124)
PWM (Da):   %s   15464.78 (12924.5) Transmb domain:   %s   i5-27o
PI (pH):   %s   6.48 (6.49) Peptide Signal:   %s   cut: 24 range:24-147
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGNTILNLCF VFLFMSMVLP VLGQGGLKTG FYSSSCSKAE SIVRSTVEAE FNKDPTIAAA LLRLHFHDCF VQGCDGSILI SGTSAERNAV TNLGLRGFEV IDNAKKQLET SCPGVVSCAD 
ILALVARDAV DLSGGQSWGV PTGRRDG 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. 3' end is missing and frame shift after GGP.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGCTAAGCAA TCAACTTTGT AAGTGAGGCT ATTGTATCCA AAGGTAAACC GAGTAAGATG GGAAATACCA TTCTAAACTT GTGTTTTGTT TTTCTTTTTA TGTCTATGGT TTTGCCTGTT  CTTGGCCAAG GAGGACTAAA AACCGGGTTT TATTCATCGT CATGCTCAAA AGCCGAGTCT ATAGTAAGAT CAACCGTTGA AGCAGAGTTT AATAAAGATC CTACGATTGC TGCAGCTTTA  CTTAGGCTTC ATTTCCATGA TTGTTTTGTT CAGGGTTGTG ACGGTTCTAT TTTGATATCG GGAACTTCTG CTGAGAGAAA TGCAGTGACT AATTTGGGAC TAAGAGGATT TGAGGTGATT  GATAATGCAA AAAAACAGCT TGAGACTTCA TGTCCTGGTG TTGTTTCCTG TGCTGACATC CTAGCATTAG TTGCTCGTGA CGCTGTAGAC TTGAGTGGAG GTCAAGCTGG GGAGTGCCTA 
CTGGAAGAAG AGATGG 

Retrieve as FASTA