Entry information : NtPrx50-1A (NtPrx50a)
Entry ID 8269
Creation 2011-04-13 (Christophe Dunand)
Last sequence changes 2011-04-13 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-04-13 (Christophe Dunand)
Peroxidase information: NtPrx50-1A (NtPrx50a)
Name (synonym) NtPrx50-1A (NtPrx50a)
Class Class III peroxidase     [Orthogroup: Prx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx50-1A
start..stop
S start..stop
NtPrx41-1A 283 2e-97 1..153 1..153
NtPrx41-1B 268 5e-92 1..153 1..153
LePrx14 258 1e-87 1..153 1..152
StPrx15 247 1e-83 17..153 16..152
Literature and cross-references NtPrx50-1A (NtPrx50a)
EST ref. GenBank:   FG176766.1 [5' end]
Protein sequence: NtPrx50-1A (NtPrx50a)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   153 (132)
PWM (Da):   %s   16685.63 (14462.4)  
PI (pH):   %s   9 (8.90) Peptide Signal:   %s   cut: 22 range:22-153
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAIKMLLFLC ISALLSTSSL SQRHSPLNTA FYRKSCPRFE QIMEETTTNK QITSPTTAAA TLRLFFHDCF VGGCDASVLV SSTPFNKAER DAQIHLSLPG EGFHVVVRAK NALELSWPGI 
VSWSEILPVP ARNLGLQTGG PFYPVKLGRK ESF 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. 3' end is missing.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GAAAATAGCT TAGCTTAAAC TGTGAAAATG GCTATAAAAA TGCTTCTTTT TCTATGCATT TCCGCCTTAT TAAGTACTTC CTCTTTATCC CAGCGCCATT CGCCGCTAAA TACTGCTTTT  TACCGCAAAT CATGCCCAAG ATTTGAGCAG ATAATGGAAG AAACCACTAC AAACAAACAG ATCACTTCTC CTACTACCGC CGCCGCCACC CTCCGCCTCT TCTTCCACGA CTGCTTCGTC  GGCGGCTGTG ACGCCTCCGT ACTTGTCTCC TCCACTCCCT TCAACAAAGC CGAACGTGAC GCCCAAATCC ACCTTTCCCT CCCCGGCGAA GGCTTCCACG TGGTCGTACG CGCCAAGAAC  GCGCTTGAAC TTTCCTGGCC AGGTATAGTC TCTTGGTCCG AAATTCTCCC CGTCCCTGCC CGAAACCTTG GCCTCCAAAC TGGCGGCCCG TTTTATCCAG TTAAATTGGG CCGTAAAGAA 
TCCTTT 

Retrieve as FASTA