Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
339 (300) |
PWM (Da): |
36058.06 (32174.0) |
Transmb domain: |
i21-43o |
PI (pH):
| 6.83 (6.30) |
Peptide Signal:
| cut: 40 range:40-339 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MHMAACTRTS TGSNKPPSLC LLLLVHALLL AIASSPAGGL QVGFYQQTCP QAESIVRNVT WARAAADPSL AGKLLRLYFH DCFPQGCDAS VLLDGRGTEK AAPPNQSLGG LDVVDAAKAA
LEAACPGTVS CADVVALATR DAVSFQFRRS LWQVETGRRD NRFSDEAHAT DLPSPEFVFP LLRDSFAKRG LGVRDLVALS GAHTLGHTDC QFVSPRLYTF QGNGGVDPFI DPSYARELMR
QCPATPPPSS SSSSGKVALD PGSEFTFDTS YYATIKANRG ALHTDSVLLH DDEAARLVDE MHDQGKFLTA FAASIQKLGA FGVITGNKGE IRRNCHVVN
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 1, no intron) and 2 ESTs. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCATATGG CTGCTTGTAC CCGCACCAGC ACCGGCAGCA ACAAGCCGCC GTCGCTGTGC CTGCTCCTCC TCGTCCACGC GCTGCTGCTC GCCATCGCGT CGTCTCCTGC CGGCGGTCTC
CAGGTGGGCT TCTACCAGCA GACCTGCCCC CAGGCGGAGT CCATCGTTCG GAACGTGACC TGGGCGCGGG CGGCCGCGGA CCCGAGCCTG GCCGGCAAGC TGCTGCGGCT CTACTTCCAC
GACTGCTTCC CGCAGGGCTG CGACGCGTCG GTGCTGCTGG ACGGCCGGGG CACGGAGAAG GCGGCGCCGC CGAACCAGTC GCTGGGCGGG CTGGACGTCG TCGACGCCGC CAAGGCGGCG
CTGGAGGCGG CCTGCCCGGG CACCGTCTCC TGCGCGGACG TCGTGGCGCT GGCCACCCGC GACGCCGTCT CCTTCCAGTT CCGCCGCTCG CTGTGGCAAG TCGAGACGGG CCGCCGCGAC
AACCGCTTCT CCGACGAGGC GCACGCCACG GACCTGCCCA GCCCGGAGTT CGTGTTCCCG CTCCTCAGGG ACTCCTTCGC CAAGCGGGGG CTCGGCGTCC GCGACCTCGT CGCGCTCTCC
GGCGCGCACA CGCTGGGACA CACGGACTGC CAGTTCGTGT CACCGAGGCT CTACACCTTC CAGGGCAACG GCGGGGTGGA CCCGTTCATC GACCCGAGCT ACGCGCGGGA GCTCATGCGC
CAGTGCCCCG CCACGCCGCC GCCGTCGTCG TCGTCGTCGT CCGGCAAGGT GGCCTTGGAC CCTGGCAGCG AGTTCACGTT CGACACCAGC TACTACGCCA CCATCAAGGC CAACCGCGGC
GCGCTGCACA CGGACTCCGT GCTGCTGCAC GACGACGAGG CCGCCCGCCT CGTCGACGAG ATGCACGACC AAGGCAAGTT CCTCACCGCC TTCGCCGCGT CCATCCAGAA GTTGGGAGCC
TTCGGCGTCA TCACCGGCAA CAAAGGGGAG ATCAGGAGGA ACTGCCACGT CGTCAACTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCATATGG CTGCTTGTAC CCGCACCAGC ACCGGCAGCA ACAAGCCGCC GTCGCTGTGC CTGCTCCTCC TCGTCCACGC GCTGCTGCTC GCCATCGCGT CGTCTCCTGC CGGCGGTCTC
CAGGTGGGCT TCTACCAGCA GACCTGCCCC CAGGCGGAGT CCATCGTTCG GAACGTGACC TGGGCGCGGG CGGCCGCGGA CCCGAGCCTG GCCGGCAAGC TGCTGCGGCT CTACTTCCAC
GACTGCTTCC CGCAGGGCTG CGACGCGTCG GTGCTGCTGG ACGGCCGGGG CACGGAGAAG GCGGCGCCGC CGAACCAGTC GCTGGGCGGG CTGGACGTCG TCGACGCCGC CAAGGCGGCG
CTGGAGGCGG CCTGCCCGGG CACCGTCTCC TGCGCGGACG TCGTGGCGCT GGCCACCCGC GACGCCGTCT CCTTCCAGTT CCGCCGCTCG CTGTGGCAAG TCGAGACGGG CCGCCGCGAC
AACCGCTTCT CCGACGAGGC GCACGCCACG GACCTGCCCA GCCCGGAGTT CGTGTTCCCG CTCCTCAGGG ACTCCTTCGC CAAGCGGGGG CTCGGCGTCC GCGACCTCGT CGCGCTCTCC
GGCGCGCACA CGCTGGGACA CACGGACTGC CAGTTCGTGT CACCGAGGCT CTACACCTTC CAGGGCAACG GCGGGGTGGA CCCGTTCATC GACCCGAGCT ACGCGCGGGA GCTCATGCGC
CAGTGCCCCG CCACGCCGCC GCCGTCGTCG TCGTCGTCGT CCGGCAAGGT GGCCTTGGAC CCTGGCAGCG AGTTCACGTT CGACACCAGC TACTACGCCA CCATCAAGGC CAACCGCGGC
GCGCTGCACA CGGACTCCGT GCTGCTGCAC GACGACGAGG CCGCCCGCCT CGTCGACGAG ATGCACGACC AAGGCAAGTT CCTCACCGCC TTCGCCGCGT CCATCCAGAA GTTGGGAGCC
TTCGGCGTCA TCACCGGCAA CAAAGGGGAG ATCAGGAGGA ACTGCCACGT CGTCAACTAA
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Retrieve as FASTA
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