Entry information : NtPrx54-1B (NtPrx54b)
Entry ID 8276
Creation 2011-04-13 (Christophe Dunand)
Last sequence changes 2011-04-13 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-04-13 (Christophe Dunand)
Peroxidase information: NtPrx54-1B (NtPrx54b)
Name (synonym) NtPrx54-1B (NtPrx54b)
Class Class III peroxidase     [Orthogroup: Prx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx54-1B
start..stop
S start..stop
NtPrx54-1A 283 6e-100 1..151 1..148
StPrx22 224 3e-74 12..151 4..158
LePrx94 223 9e-74 12..151 4..159
EcamPrx121 184 1e-58 16..151 11..138
Literature and cross-references NtPrx54-1B (NtPrx54b)
EST ref. GenBank:   FS389200.1 [5' end]
Protein sequence: NtPrx54-1B (NtPrx54b)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   151 (123)
PWM (Da):   %s   16290.48 (13275.9) Transmb domain:   %s   i7-29o
PI (pH):   %s   9.75 (10.02) Peptide Signal:   %s   cut: 29 range:29-151
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MNSFKGSNFV ILAVLFCLIL SLSVFAEASS RNKHKPKSKK STFGVGFYKR SCPASEAIIR KAVFKAVLMN PGTAAGIIRM HFHDCFIRGC DGSVLLDSVR GKETAEKDSP INNPSLRGFE 
VIDEAKALLE KVCPRTVSCA DILAFAARDS A 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. 3' end is missing.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGAGAAAAGG AAAAATGAAT TCTTTCAAGG GTTCTAATTT TGTAATATTA GCAGTGCTCT TTTGTTTGAT TCTTTCTCTT TCTGTATTTG CTGAGGCTTC GTCGAGGAAC AAACATAAGC  CCAAATCAAA AAAATCAACG TTTGGTGTTG GATTCTATAA AAGATCATGT CCAGCTTCTG AGGCCATTAT AAGAAAAGCC GTATTCAAAG CGGTTCTGAT GAATCCCGGC ACTGCTGCTG  GCATTATTCG CATGCATTTC CATGACTGCT TTATCAGGGG TTGTGATGGT TCGGTGTTGC TTGATTCGGT GAGAGGAAAG GAAACGGCTG AGAAAGATAG TCCCATTAAC AACCCAAGCC 
TTCGAGGGTT TGAGGTTATT GATGAAGCAA AAGCATTGCT GGAAAAAGTA TGTCCGCGCA CAGTTTCGTG CGCGGACATA CTTGCCTTTG CTGCAAGAGA TAGCGCCTT 

Retrieve as FASTA