Entry information : NtAPx01-2
Entry ID 8288
Creation 2011-04-14 (Christophe Dunand)
Last sequence changes 2011-04-14 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-04-19 (Christophe Dunand)
Peroxidase information: NtAPx01-2
Name NtAPx01-2
Class Ascorbate peroxidase     [Orthogroup: APx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtAPx01-2
start..stop
S start..stop
NtAPx01-1B 402 2e-142 1..204 233..435
StAPx06 392 2e-138 1..204 221..423
LeAPx08 387 1e-136 1..204 219..421
CroAPx04 371 5e-130 1..204 240..442
Literature and cross-references NtAPx01-2
Protein sequence: NtAPx01-2
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   204
PWM (Da):   %s   22731.45 Transmb domain:   %s   i184-203o
PI (pH):   %s   5.88
Sequence
Send to BLAST
Send to Peroxiscan
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LRDVFYRMLN DKEMGNVALS GAHTLGRSRP ERSGWGKPET RYTKDGPGNP GGQSWTVQWL KFDNSYFKDI KERRDEDLLV LPTDAVLFED SSFKEYAEKY AVNQDVFFKD YAEAHAKLSN 
LGAKFDPPEG SSIDNTPTQG QPEKFVAAKY STGKRELSDA MKQKIRAEYE GFGGSADKPL PTNYFLNIMI VIGVLAILTS LLGN 

Retrieve as FASTA  
Remarks Partial sequence from ESTs. 5' end is missing. Several Frame shift in the contig.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TCTGCACCGA GATGCCAGAG AGGAGCTTCT GATGCTGTCT CTCCCTGCTC TCATTACGAG ATGTTTTCTA CAGAATGGGC TAAACGATAA GGAAATGTCG CACTTTCTGG GGCACACACT  TTGGGGAGAT CCAGACCAGA GCGTAGTGGT TGGGGCAAGC CAGAAACAAG ATACACGAAA GATGGTCCAG GAAACCCTGG AGGACAATCA TGGACTGTGC AGTGGTTGAA GTTTGACAAT  TCCTACTTTA AGGACATTAA AGAGAGAAGA GACGAAGATC TGCTAGTTTT GCCAACAGAC GCGGTTCTTT TTGAAGATTC TTCATTTAAG GAATATGCAG AGAAGTATGC TGTAAATCAA  GATGTATTTT TCAAAGATTA TGCGGAAGCA CATGCTAAAC TGAGCAACCT TGGAGCCAAA TTTGATCCTC CTGAGGGTTC CTCAATAGAC AATACTCCTA CACAAGGTCA GCCAGAGAAG  TTTGTGGCAG CAAAATACTC AACCGGAAAG GATTAAATAC AACTTATCGT CTTTAGTTCT GCCGTTTCTT TTAATTTGCC AAGATCAAGC TATTACCAAA ATTTTGCTCT CAAAAATAAA  ATTTGGTAGC CTAATGAAGG AGAAATAAAT TCAACGAGTC TTGCCTATTT GAATTGCAGA GAGAGCTCTC GGATGCTATG AAACAAAAGA TTCGAGCAGA ATATGAAGGT TTTGGGGGGA  GCGCAGATAA GCCTCTCCCA ACAAACTATT TTCTCAATAT CATGATTGTG ATTGGTGTTT TGGCAATTTT GACATCTTTG CTTGGAAACT GAGATGGCTT TGGTTTGATC TTGTAGATAT 
TTTGAGTGCT TTATATCGGC ATTATTGAGA ATGGAAATTT TGCCCTGTCA TATAGCAAAA ATT 

Retrieve as FASTA