Entry information : NtPrx48-1B (NtPrx48b)
Entry ID 8290
Creation 2011-04-14 (Christophe Dunand)
Last sequence changes 2011-04-14 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-04-14 (Christophe Dunand)
Peroxidase information: NtPrx48-1B (NtPrx48b)
Name (synonym) NtPrx48-1B (NtPrx48b)
Class Class III peroxidase     [Orthogroup: Prx003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx48-1B
start..stop
S start..stop
NtPrx48-1A 390 4e-141 1..197 1..198
NtPrx46-1A 382 5e-138 1..197 1..198
LePrx02 360 2e-127 1..197 1..198
LePrx60 359 8e-127 1..197 1..198
Literature and cross-references NtPrx48-1B (NtPrx48b)
EST ref. GenBank:   FS416772.1 [5' end]
Protein sequence: NtPrx48-1B (NtPrx48b)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   197 (172)
PWM (Da):   %s   21135.97 (18453.6) Transmb domain:   %s   i5-27o
PI (pH):   %s   8.37 (8.49) Peptide Signal:   %s   cut: 26 range:26-197
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MANFGYLGNF LLFCILLGIV TSSHAQLQLN FYAKSCPKAE KIIQDYVQKH IPNAPSLAAA LLRLQFHDCF VRGCDGSVLL NFTSSTKNQT EKVAIPNQTL RGFSFIDDVK KIVEAECPGV 
VSCADIVALV SRDSVVVTGG PYWNVPTGRR DGRISNASEA LANIPPTSNF SSLKTSFASK GLDLKDLVLL SGAHTIG 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. 3'end is missing and frame shift after ASEALANIPP.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGCATGTGTA GCAACTCGAA GAAAGAAAGA GAGACATCTT TCAATTCAAA GTTGCAAAAA AACTTATAAT TAAAATGGCT AACTTTGGCT ATTTGGGTAA TTTTCTACTG TTCTGTATTC  TACTAGGAAT AGTGACTTCT AGCCATGCTC AGTTACAGCT CAACTTTTAT GCGAAGAGCT GTCCAAAAGC AGAGAAGATA ATTCAAGATT ATGTCCAAAA GCACATCCCA AATGCTCCAT  CTCTTGCAGC TGCCTTGCTC AGACTGCAGT TCCACGATTG TTTTGTCAGG GGTTGTGATG GATCTGTGCT CCTGAATTTC ACTTCAAGCA CGAAAAACCA GACTGAAAAA GTGGCTATCC  CTAATCAAAC ACTGAGAGGC TTCTCATTCA TTGATGATGT GAAGAAAATA GTTGAAGCTG AATGCCCTGG AGTTGTCTCT TGTGCAGATA TTGTTGCATT AGTTTCTAGA GACTCTGTTG  TGGTCACAGG AGGTCCTTAC TGGAATGTTC CAACTGGTAG AAGAGATGGA AGAATATCAA ACGCGTCCGA AGCTTTGGCA AACATCCCTC CTCGCAACTA GTAACTTTTC CAGTTTAAAG 
ACATCTTTTG CTAGCAAAGG TCTTGACCTA AAAGATTTGG TCCTATTGTC TGGTGCACAT ACTATTGGAG 

Retrieve as FASTA