Entry information : NtPrx62-1A (NtPrx62a)
Entry ID 8293
Creation 2011-04-14 (Christophe Dunand)
Last sequence changes 2011-04-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-04-14 (Christophe Dunand)
Peroxidase information: NtPrx62-1A (NtPrx62a)
Name (synonym) NtPrx62-1A (NtPrx62a)
Class Class III peroxidase    [Orthogroup: Prx006]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx62-1A
start..stop
S start..stop
NtPrx62-1B 646 0 1..324 1..324
LePrx04 597 0 1..324 1..322
LePrx18 530 0 1..324 1..324
StPrx08 492 2e-177 1..324 1..322
Literature and cross-references NtPrx62-1A (NtPrx62a)
EST ref. GenBank:   FS400464.1 [5' end]
Protein sequence: NtPrx62-1A (NtPrx62a)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (301)
PWM (Da):   %s   35259.05 (32697.6)  
PI (pH):   %s   8.62 (8.72) Peptide Signal:   %s   cut: 24 range:24-324
Sequence
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Send to Peroxiscan
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MATLKLLSFL ILQIFCILEV ANSQGVELGF YKKTCPNVEA IVKQTTAHYI SRAPTLAAPL LRMHFHDCFV RGCDGSVLLN STKGNQAEKD AIPNQSLRGF QVIDAAKSAL EKECPGIVSC  SDILALAARD AVELINGPTW AVPLGRRDGR VSILLDALKN LPTPFDNFTT LKTTFGSLGL NVKDLVVLSG GHTIGMSHCF SFSSRLYNFT GKGDMDPNMD QNYIGRLKIK CKSGDVTTIV 
EMDPGSFKSF DTDYYTMVSK RRGLFASDAA LLTDSQTKAY VLSQVNPYGS TFFKDFGESM IKMGKIGVLT GKAGEIRKHC AFRN 

Retrieve as FASTA  
Remarks Complete sequence from 1 EST and GSS (3 introns).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CGAATCAGCT TATCGATACC GTCTTTTTCC TTATTATATC TTTTTGTTAA TGTAGGGATG TGATGGTTCA GTGCTACTGA ATTCAACAAA AGGTAATCAA GCAGAGAAAG ATGCAATTCC  AAATCAAAGC CTGAGGGGAT TCCAAGTAAT TGATGCTGCT AAATCTGCTT TAGAGAAAGA GTGTCCTGGC ATTGTGTCTT GCTCTGATAT TTTAGCCTTA GCAGCCCGTG ATGCTGTTGA  ACTGGTAACT AAATAAATAC TTAGTAAATT CAATCAATTT ATTAGAATTT CAAATACTTA TATAATATGT TATAGGGTTA TTTCAGATTA ATGGACCAAC TTGGGCAGTT CCCTTGGGAA  GAAGAGATGG GAGAGTTTCA ATACTCTTAG ATGCCTTAAA GAATTTGCCA ACTCCTTTTG ATAACTTCAC TACTCTTAAA ACAACATTTG GCTCCTTGGG CTTAAATGTA AAAGACCTTG  TTGTTTTATC AGGTAAAATT GATATTTTAC CGTGAAACAA CTACATGTGG AAGAGTTACA TTAATTCAAC AAATCCAAAA TTTATATTCT TTTATTTTCT CCTTGTTTAT TCGTAGGAGG  ACACACTATT GGAATGTCAC ATTGTTTTTC CTTCTCAAGC CGTTTGTACA ATTTCACTGG CAAAGGTGAC ATGGACCCGA ACATGGATCA GAACTACATA GGTCGTTTGA AGATCAAATG  TAAGTCAGGA GATGTGACCA CCATTGTCGA AATGGACCCT GGAAGTTTCA AAAGTTTTGA CACTGATTAT TACACCATGG TTAGCAAAAG AAGAGGGTTA TTCGCATCTG ATGCAGCTCT  TCTCACCGAT AGTCAAACAA AAGCTTATGT TTTGTCTCAA GTAAATCCCT ATGGATCCAC TTTCTTCAAA GATTTTGGAG AATCAATGAT AAAAATGGGC AAAATTGGAG TTCTTACTGG 
TAAAGCAGGT GAAATCAGAA AGCATTGTGC CTTCCGAAAC TAA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGTCATCACT TAAAGCAAGC AAGTCAGTGA GATTTTCTTC ATCATCTTTC CAAAAAGAAT AATGGCAACA TTAAAACTTC TTTCATTTCT CATTCTTCAA ATATTTTGCA TATTGGAGGT  TGCTAATTCT CAAGGTGTAG AATTAGGCTT CTATAAGAAA ACATGTCCAA ATGTAGAGGC AATTGTCAAA CAAACAACAG CTCACTACAT TTCTCGTGCT CCTACCTTGG CTGCTCCACT  CTTGAGAATG CATTTTCATG ATTGTTTTGT TAGGGGATGT GATGGTTCAG TGCTACTGAA TTCAACAAAA GGTAATCAAG CAGAGAAAGA TGCAATTCCA AATCAAAGCC TGAGGGGATT  CCAAGTAATT GATGCTGCTA AATCTGCTTT AGAGAAAGAG TGTCCTGGCA TTGTGTCTTG CTCTGATATT TTAGCCTTAG CAGCCCGTGA TGCTGTTGAA CTGATTAATG GACCAACTTG 
GGCAGTTCCC TTGGGAAGAA GAGATGGGAG AGTTTCAATA CTCTTAGATG CCTTAAAGAA TTTGCCAACT CCTTTTGATA ACTTCACTAC TCTTAAAACA ACATTTGGCT C 

Retrieve as FASTA