Entry information : NtPrx86-1A (NtPrx86a)
Entry ID 8339
Creation 2011-04-26 (Christophe Dunand)
Last sequence changes 2011-04-26 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-04-26 (Christophe Dunand)
Peroxidase information: NtPrx86-1A (NtPrx86a)
Name (synonym) NtPrx86-1A (NtPrx86a)
Class Class III peroxidase     [Orthogroup: Prx004]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx86-1A
start..stop
S start..stop
NtPrx86-1B 283 7e-100 1..144 1..144
LePrx67 279 3e-96 1..144 1..144
NtPrx35-1B 255 9e-87 1..144 1..144
StPrx12 249 2e-84 1..144 1..144
Literature and cross-references NtPrx86-1A (NtPrx86a)
DNA ref. GenBank:   ET833589.1 [5' end]
EST ref. GenBank:   EB424758.1 [5' end]
Protein sequence: NtPrx86-1A (NtPrx86a)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   144 (122)
PWM (Da):   %s   15573.02 (13128.8) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.11 (8.21) Peptide Signal:   %s   cut: 28 range:23-144
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVQSLSFFMV IVLLAFAPIC FSTKAYGGYL FPQFYDQSCP QAKEIVKFIV AKAVAKEARM AASLLRLHFH DCFVKGCDAS LLLDSSGSII SEKRSNPNRN SARGFEVIDE IKKALEKECP 
QTVSCADILA LAARDSTVLV GGPN 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST and 1 GSS (exon 1). 3'end is missing.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CTTATCGATA CCGTCATACC CCAATAATTT CCATACCAAG TCCACATCCT TTTGTTTTAT TATATTATTA ACCTTGATCA ACTTTGTATT CTTGATCAAG TTTGTAAAGG TTTAAAATAG  CTAATTAAGC TACTAGTAAG GTAAGAAGTA GTTACCAAAC ATCTGTATTG CATTAAGAAT GAGTTGAGCT TTGAAAACTT TTACGTAGCT GAATGTCATT TCCTTATCAC AGACCAAATC  AATCATCATT GTACTTGTAA AGCACATGAC ACTGCTACAC TATATAGGTA ATAACTAATG AAAAAAACGG AGTACTAATC ATAACTAATA AGCTACCAAC TCCATCAATA TGTCTCCCCT  TTGTAACAAC ACTCCATTCA TTAAACACTA TATATAGCAC TCGTAACTTG CCTTCAATTT CATCAAAGCA AGCCATATAG CCTACTTACA TTCTCAAACT AGTCTCTTAT ATACCAAGTT  ACCTTATTAA TACTCTTTAA GTATGGTTCA ATCCTTGAGC TTCTTCATGG TTATTGTTCT CCTTGCTTTT GCACCAATTT GTTTCTCTAC TAAGACTTAT GGTGGTTACT TATTCCCACA  ATTTTATGAC CAATCATGTC CCCAAGCAAA AGAAATTGTT AAGTTTATTG TTGCCAAGGC TGTAGCCAAA GAAGCTCGAA TGGCTGCTTC ATTATTGAGG TTGCATTTTC ACGACTGCTT  TGTCAAGGTA AAGCTCTCAT GTTATTATAT GCATGTCACG CCTTATTTTA TGCAGTATTT ATATTTGTTA GAGCAATGAT ACATACCATG ATATATACAA AAAAAAAAAA AGGATTATTT 
CCATCCTATC GATGAAGAAA TTCAGTTGAA CCCTTCCGAA CCACGTAGCT CGGACTGAAT ATTATATTCC ATGTGG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGGAAAGCAA GCCATATAGC CTACTTACAT TCTCAAACTA GTCTCTTATA TACCAAGTTA CCTTATTAAT ACTCTTTAAG TATGGTTCAA TCCTTGAGCT TCTTCATGGT TATTGTTCTC  CTTGCTTTTG CACCAATTTG TTTCTCTACT AAGGCTTATG GTGGTTACTT ATTCCCACAA TTTTATGACC AATCATGTCC CCAAGCAAAA GAAATTGTTA AGTTTATTGT TGCCAAGGCT  GTAGCCAAAG AAGCTCGAAT GGCTGCTTCA TTATTGAGGT TGCATTTTCA CGACTGCTTT GTCAAGGGGT GTGATGCATC TCTGCTTCTT GACAGCAGTG GAAGCATAAT TAGTGAGAAA  AGATCAAATC CCAACAGGAA TTCGGCTCGT GGATTTGAAG TCATTGATGA GATTAAGAAG GCATTAGAAA AGGAGTGCCC TCAAACAGTC TCTTGTGCAG ACATCTTGGC ATTAGCTGCA 
AGGGATTCAA CAGTTTTAGT CGGTGGACCA AAT 

Retrieve as FASTA