Entry information : MpuAPx-R
Entry ID 8359
Creation 2011-05-04 (Christophe Dunand)
Last sequence changes 2011-05-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-05-10 (Christophe Dunand)
Peroxidase information: MpuAPx-R
Name MpuAPx-R
Class Ascorbate peroxidase related    [Orthogroup: APx-R001]
Taxonomy Eukaryota Viridiplantae Chlorophyta Prasinophyceae Micromonas
Organism Micromonas pusilla    [TaxId: 38833 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MpuAPx-R
start..stop
S start..stop
OlAPx-R 308 1e-104 105..346 73..317
OtAPx-R 303 9e-103 69..346 36..310
BprAPx-R01 288 8e-96 90..343 105..365
EUgAPx-R01 261 5e-87 109..345 1..237
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 12828..13871 1044  
join(12828..13871)


exon

Literature and cross-references MpuAPx-R
DNA ref. GenBank:   NW_003315885.1 (12828..14760)
Protein sequence: MpuAPx-R
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   347
PWM (Da):   %s   36113.56  
PI (pH):   %s   9.44
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSSAAALGAL APPRGAPRVL GVARDRRGSR RAVAARASSS DASSSSSSST TRSSSPTAPS PGTPRVATSR RDVLALAATA LLASKTLVAP SSSTASVTAS SAFVDTPEIR AALREALVAN  VVKTKAPAVL RLVFHDAGTY RVASNDGGMN GSVKYELSRP ESFGLKRGLG PVLATMDALR DTPAAAASLA DVIAAAGAYA VELTGGPIIR VRLGRVDAVS ADPENRMPAD TLTGEEQRAH 
FVRAGFSTRE MVAIAGAHTI GGKGFGEPYV FDNEYYKTLL ARPWADATKS KEELDMASHI GLTSDKNLAT DEPSLEYVRK YAEDQGLFFE DFGAAYLKLT EQGATWR 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no introns). No EST. Strain="CCMP1545".
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCGTCCG CCGCGGCGCT CGGCGCCCTC GCGCCGCCGC GCGGCGCGCC TCGTGTCCTC GGCGTCGCCC GAGACCGTCG AGGATCGCGC CGCGCCGTCG CCGCGCGCGC GTCCTCGTCC  GACGCGTCGT CGTCGTCGTC GTCGTCGACG ACGCGATCAT CATCGCCGAC CGCGCCATCA CCCGGGACGC CGCGCGTCGC GACATCGCGA CGCGACGTCC TCGCGCTCGC CGCGACCGCG  CTCCTCGCGT CGAAAACCCT CGTCGCGCCG TCGTCCTCGA CGGCGTCGGT CACGGCGTCG TCCGCGTTCG TCGACACCCC CGAGATCCGC GCGGCTCTCC GCGAGGCGCT CGTCGCGAAC  GTCGTCAAGA CGAAAGCGCC CGCGGTCCTC CGGCTCGTGT TCCACGACGC CGGCACCTAC CGCGTCGCCT CGAACGACGG CGGGATGAAC GGCAGCGTGA AGTACGAGCT GTCGCGACCG  GAGAGCTTCG GCCTGAAGCG CGGCCTCGGA CCAGTTCTCG CGACGATGGA CGCGTTGCGA GACACGCCCG CGGCGGCGGC GTCGCTCGCG GACGTGATCG CCGCCGCGGG CGCGTACGCG  GTCGAGCTGA CCGGCGGGCC GATCATTCGC GTCCGGCTCG GTCGCGTCGA CGCGGTGAGC GCGGACCCCG AGAACCGGAT GCCCGCGGAT ACGCTGACCG GGGAGGAGCA GCGCGCGCAC  TTCGTGCGCG CGGGGTTCTC GACGAGAGAG ATGGTCGCAA TCGCGGGCGC GCACACGATC GGCGGGAAAG GGTTCGGCGA GCCGTACGTC TTCGATAACG AGTACTACAA GACGCTGCTC  GCGCGGCCGT GGGCAGACGC GACGAAGAGT AAGGAGGAGC TGGACATGGC GTCGCACATC GGGTTGACGT CGGACAAGAA CCTCGCGACG GACGAGCCGA GTCTGGAGTA CGTGCGGAAA 
TACGCGGAGG ACCAGGGGTT GTTCTTCGAG GACTTCGGCG CGGCGTATCT CAAGCTCACG GAGCAAGGGG CGACGTGGAG GTGA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCGTCCG CCGCGGCGCT CGGCGCCCTC GCGCCGCCGC GCGGCGCGCC TCGTGTCCTC GGCGTCGCCC GAGACCGTCG AGGATCGCGC CGCGCCGTCG CCGCGCGCGC GTCCTCGTCC  GACGCGTCGT CGTCGTCGTC GTCGTCGACG ACGCGATCAT CATCGCCGAC CGCGCCATCA CCCGGGACGC CGCGCGTCGC GACATCGCGA CGCGACGTCC TCGCGCTCGC CGCGACCGCG  CTCCTCGCGT CGAAAACCCT CGTCGCGCCG TCGTCCTCGA CGGCGTCGGT CACGGCGTCG TCCGCGTTCG TCGACACCCC CGAGATCCGC GCGGCTCTCC GCGAGGCGCT CGTCGCGAAC  GTCGTCAAGA CGAAAGCGCC CGCGGTCCTC CGGCTCGTGT TCCACGACGC CGGCACCTAC CGCGTCGCCT CGAACGACGG CGGGATGAAC GGCAGCGTGA AGTACGAGCT GTCGCGACCG  GAGAGCTTCG GCCTGAAGCG CGGCCTCGGA CCAGTTCTCG CGACGATGGA CGCGTTGCGA GACACGCCCG CGGCGGCGGC GTCGCTCGCG GACGTGATCG CCGCCGCGGG CGCGTACGCG  GTCGAGCTGA CCGGCGGGCC GATCATTCGC GTCCGGCTCG GTCGCGTCGA CGCGGTGAGC GCGGACCCCG AGAACCGGAT GCCCGCGGAT ACGCTGACCG GGGAGGAGCA GCGCGCGCAC  TTCGTGCGCG CGGGGTTCTC GACGAGAGAG ATGGTCGCAA TCGCGGGCGC GCACACGATC GGCGGGAAAG GGTTCGGCGA GCCGTACGTC TTCGATAACG AGTACTACAA GACGCTGCTC  GCGCGGCCGT GGGCAGACGC GACGAAGAGT AAGGAGGAGC TGGACATGGC GTCGCACATC GGGTTGACGT CGGACAAGAA CCTCGCGACG GACGAGCCGA GTCTGGAGTA CGTGCGGAAA 
TACGCGGAGG ACCAGGGGTT GTTCTTCGAG GACTTCGGCG CGGCGTATCT CAAGCTCACG GAGCAAGGGG CGACGTGGAG GTGA 

Retrieve as FASTA