Entry information : AcaAPx-CcP02
Entry ID 8361
Creation 2011-05-04 (Christophe Dunand)
Last sequence changes 2011-05-04 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-05-04 (Christophe Dunand)
Peroxidase information: AcaAPx-CcP02
Name AcaAPx-CcP02
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Dinophyceae Gymnodiniaceae Amphidinium
Organism Amphidinium carterae    [TaxId: 2961 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AcaAPx-CcP02
start..stop
S start..stop
AcaAPx-CcP01 388 4e-138 64..287 2..225
TpsCcP04 120 1e-31 110..301 53..238
TpsAPx05 113 9e-30 129..301 13..178
GsAPx01 86 9e-20 65..285 62..261
Literature and cross-references AcaAPx-CcP02
Literature Bachvaroff,T.R. and Place,A.R. From stop to start: tandem gene arrangement, copy number and trans-splicing sites in the dinoflagellate Amphidinium carterae. PLoS ONE 3 (8), E2929 (2008).
mRNA ref. GenBank:   EU742799.1 [5' end]
Protein sequence: AcaAPx-CcP02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   301 (278)
PWM (Da):   %s   32307.08 (29925.8)  
PI (pH):   %s   4.47 (4.39) Peptide Signal:   %s   cut: 24 range:24-301
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MCKLSLLPTA LLAVAMLLHG CDSDTESDGP QNFLSTSTTS FGDSSPDNLN GSLTSQWPAS IMECPGTSVQ TTPSLSCSQY DAIVNTIRSI YLQLDTVCTA TNCPQADWAG CVLRVAGHDL  MDYANGQGGS DGCLDLFDAD NAGLPECLHS GHHGFSLLDA YQRHCSEISL ADFIVLAAEA VITFSREYAT GGTVDMDLRS NFRYGRTTAA TCTFAEGRLP NPEDSCTAVE DTFVHRMGLS 
WRQAAALMGV HSIGRARTEN SGYDGWWSDA VNSRKFNNNY YASIVGKGWM PENLGPNKNQ W 

Retrieve as FASTA  
Remarks Partial sequence from 1 mRNA. 3\'end is missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTGCAAGC TCAGCTTGTT GCCGACTGCT TTGTTGGCAG TAGCCATGCT GTTGCATGGC TGTGACTCTG ACACAGAATC AGATGGTCCA CAAAATTTCT TGAGCACAAG TACAACAAGC  TTTGGAGATT CATCTCCTGA CAACCTCAAT GGTTCATTGA CGTCGCAATG GCCTGCCAGT ATCATGGAGT GCCCAGGTAC TAGTGTTCAG ACCACTCCCA GTCTCAGTTG CTCGCAGTAT  GATGCGATAG TAAACACGAT CCGCAGCATC TATCTTCAGC TCGATACTGT GTGCACCGCC ACCAATTGCC CGCAGGCGGA TTGGGCAGGA TGTGTGTTGC GTGTTGCTGG TCATGATCTC  ATGGACTACG CAAACGGCCA GGGTGGAAGT GATGGATGCT TGGATCTCTT CGATGCTGAC AATGCAGGGT TGCCTGAGTG CTTGCACAGT GGACACCATG GCTTCTCTCT GCTGGATGCG  TACCAGAGGC ATTGCTCTGA GATATCCCTT GCAGACTTCA TTGTCCTGGC AGCCGAAGCC GTTATCACCT TCTCCAGAGA GTATGCCACA GGGGGCACTG TGGACATGGA CCTGAGAAGC  AACTTTAGAT ATGGGAGAAC CACGGCTGCA ACCTGTACCT TTGCCGAGGG TCGCTTGCCA AACCCTGAGG ACAGCTGCAC AGCTGTGGAG GACACCTTTG TCCACCGCAT GGGTCTGTCA  TGGCGGCAAG CAGCAGCCCT GATGGGAGTA CATTCCATTG GCCGTGCTCG GACCGAGAAT TCCGGGTATG ATGGTTGGTG GAGTGATGCA GTGAACAGCA GAAAGTTCAA CAACAACTAC 
TATGCATCCA TTGTTGGCAA GGGGTGGATG CCGGAGAACC TGGGTCCGAA CAAGAATCAG TGG 

Retrieve as FASTA