Entry information : PraCP02 (Pr_73140T0 / Pr73140)
Entry ID 8383
Creation 2011-05-16 (Christophe Dunand)
Last sequence changes 2011-05-16 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2014-03-03 (Christophe Dunand)
Peroxidase information: PraCP02 (Pr_73140T0 / Pr73140)
Name (synonym) PraCP02 (Pr_73140T0 / Pr73140)
Class Catalase peroxidase    [Orthogroup: CP002]
Taxonomy Eukaryota Phytophthora
Organism Phytophthora ramorum    [TaxId: 164328 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PraCP02
start..stop
S start..stop
PsojCP03 1323 0 1..687 1..687
PcapCP02 1301 0 1..687 1..687
PiCP02 1263 0 1..687 1..687
PraCP01 1192 0 1..687 1..686
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 617165..619228 2064  
join(617165..619228)


exon

Literature and cross-references PraCP02 (Pr_73140T0 / Pr73140)
DNA ref. JGI genome:   scaffold_2 (617165..619228)
Protein sequence: PraCP02 (Pr_73140T0 / Pr73140)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   687 (666)
PWM (Da):   %s   73557.87 (71544.8)  
PI (pH):   %s   4.44 (4.42) Peptide Signal:   %s   cut: 22 range:22-687
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNVRLVAFVA ALAGLSSGAN AGSCPFGYDS VAAVHQQDRQ ISSELYAAQS CDVIDYALVK EDLLHLMTDS QDFWPADFGH YGGLFIRLAW HCNGSYRRAD GRGGCDGGRI RFNPERSWAD  NTNLDKALDL LEPIKLKYGD ALSWGDLIVL SGDVAIESMG GPVLGFCGGR RDDADGTSSL QLGPTPEQES VAPCAVDGQC KEPLGPTTMG LIYVNPEGPM GVPDPALSVH DVRDTFERMG  MNDRETVALI GGGHAFGKTH GACPTGPGPD PTQDPLSPWP GTCGEGAMKG KGNNTFTSGF EGAWSFTPTQ WGNGYFKGLT GLEWEKFDGP GGHVQWRPVP DTTPPVRMLT ADIALLHDAS  YHNISLEFAS NLTALNEEFS HAWYKLMSRD LGPVARCRGN DVPPAQPFQN PLPATPGSLP DFDAVRSDIR SLLTKSVDGL TSDSSSDGTP YNGALFVHAA WQCASTFRIT DYAGGCNGAK  IRFSPQKDWP VNAGVDKIIS ALEPVKESYP TLSTADLIVL AGQVALEDAG NVTIDFLGGR TDAENGNGDE ILAPREYYNT TLIAVRDNIR ILGVSPYEAV ALAGRPRSVE QQKALGYSGS 
YSNNSLTLSN EYFQVLLNET WTEVSAAEYQ AEGKNVFMLD TDLALLAAPE LKEAVQLFAS EENVFKAVFS SAWAKVMAAD HFNATSY 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAACGTCC GCCTCGTCGC CTTCGTCGCC GCGCTCGCCG GCCTGTCCAG CGGCGCCAAC GCCGGCAGCT GTCCGTTCGG CTACGACTCG GTCGCCGCCG TGCACCAGCA GGACCGCCAG  ATCTCGAGCG AGCTCTACGC CGCGCAGAGC TGCGATGTGA TCGACTACGC GCTCGTGAAG GAGGACCTGC TGCACTTGAT GACGGACTCG CAGGACTTCT GGCCCGCCGA CTTCGGCCAC  TACGGCGGCC TCTTCATCCG CCTGGCGTGG CACTGCAACG GGTCGTACCG CCGCGCCGAC GGCCGCGGTG GCTGTGACGG CGGTCGCATC CGCTTCAACC CGGAGCGCAG CTGGGCCGAC  AACACCAACC TGGACAAGGC GCTGGACCTG CTGGAGCCCA TCAAGCTCAA GTACGGCGAC GCGCTGTCGT GGGGCGACCT CATCGTGCTG TCGGGTGACG TGGCCATCGA GAGCATGGGT  GGCCCCGTGC TGGGCTTCTG CGGTGGCCGC CGCGACGACG CCGACGGGAC GAGCAGCCTG CAGCTGGGAC CGACGCCCGA GCAGGAGAGC GTGGCGCCGT GCGCCGTGGA TGGCCAGTGC  AAGGAGCCGC TGGGGCCCAC CACCATGGGC CTCATCTACG TGAACCCGGA GGGTCCGATG GGCGTGCCCG ACCCTGCGCT GTCGGTGCAC GACGTGCGCG ACACATTCGA GCGCATGGGC  ATGAACGACC GCGAGACGGT GGCGCTCATC GGCGGCGGCC ACGCCTTCGG TAAGACGCAC GGCGCGTGCC CGACGGGCCC CGGCCCCGAT CCGACGCAGG ACCCATTGAG CCCGTGGCCG  GGCACCTGCG GCGAGGGCGC CATGAAGGGC AAGGGCAACA ACACCTTCAC GAGCGGCTTC GAGGGCGCGT GGTCGTTCAC GCCCACGCAG TGGGGCAACG GCTACTTCAA GGGCCTCACC  GGCCTGGAAT GGGAGAAGTT CGACGGCCCG GGTGGCCACG TGCAGTGGCG CCCCGTGCCG GACACGACGC CGCCCGTGCG CATGCTGACG GCCGATATCG CGCTGCTGCA CGACGCGAGC  TACCACAACA TCTCGCTCGA GTTCGCGTCC AACCTGACCG CTCTGAACGA GGAGTTCTCG CACGCGTGGT ACAAGCTGAT GTCGCGCGAT CTGGGCCCCG TGGCTCGCTG CCGCGGCAAC  GATGTGCCTC CTGCTCAGCC GTTCCAGAAC CCGCTGCCGG CGACGCCTGG TAGCCTGCCG GACTTTGACG CCGTGCGCTC GGACATCCGC TCGCTGCTGA CCAAGTCGGT GGACGGTCTC  ACGAGCGACT CGAGCAGCGA CGGCACGCCG TACAACGGCG CTCTGTTCGT GCACGCCGCG TGGCAGTGCG CGTCGACGTT CCGCATCACG GACTACGCGG GCGGCTGCAA CGGCGCCAAG  ATCCGCTTCT CGCCGCAGAA GGACTGGCCG GTGAACGCTG GCGTGGACAA GATCATCTCC GCGCTGGAGC CCGTGAAGGA GTCGTACCCG ACGCTGTCGA CGGCCGACCT GATCGTGCTG  GCGGGCCAGG TGGCTCTGGA GGACGCCGGC AACGTGACCA TCGACTTCCT GGGCGGCCGC ACGGACGCTG AGAACGGCAA CGGCGACGAG ATTTTGGCGC CGCGCGAGTA CTACAACACG  ACGCTGATCG CCGTGCGCGA CAACATCAGG ATCCTGGGTG TGTCGCCGTA CGAGGCAGTG GCCCTGGCTG GCCGTCCGCG CAGCGTGGAG CAGCAGAAGG CGCTGGGCTA TAGCGGCTCG  TACAGCAACA ACTCGCTCAC GCTCTCAAAC GAGTACTTCC AGGTGCTCCT GAACGAGACG TGGACGGAGG TGTCTGCGGC GGAGTACCAG GCGGAGGGCA AGAACGTGTT CATGCTGGAC  ACGGACCTGG CGCTGCTGGC GGCTCCCGAG CTGAAGGAGG CGGTGCAGCT GTTCGCCTCG GAGGAGAACG TCTTCAAGGC TGTGTTCTCT TCGGCCTGGG CCAAGGTCAT GGCGGCCGAC 
CACTTCAACG CGACCAGCTA CTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAACGTCC GCCTCGTCGC CTTCGTCGCC GCGCTCGCCG GCCTGTCCAG CGGCGCCAAC GCCGGCAGCT GTCCGTTCGG CTACGACTCG GTCGCCGCCG TGCACCAGCA GGACCGCCAG  ATCTCGAGCG AGCTCTACGC CGCGCAGAGC TGCGATGTGA TCGACTACGC GCTCGTGAAG GAGGACCTGC TGCACTTGAT GACGGACTCG CAGGACTTCT GGCCCGCCGA CTTCGGCCAC  TACGGCGGCC TCTTCATCCG CCTGGCGTGG CACTGCAACG GGTCGTACCG CCGCGCCGAC GGCCGCGGTG GCTGTGACGG CGGTCGCATC CGCTTCAACC CGGAGCGCAG CTGGGCCGAC  AACACCAACC TGGACAAGGC GCTGGACCTG CTGGAGCCCA TCAAGCTCAA GTACGGCGAC GCGCTGTCGT GGGGCGACCT CATCGTGCTG TCGGGTGACG TGGCCATCGA GAGCATGGGT  GGCCCCGTGC TGGGCTTCTG CGGTGGCCGC CGCGACGACG CCGACGGGAC GAGCAGCCTG CAGCTGGGAC CGACGCCCGA GCAGGAGAGC GTGGCGCCGT GCGCCGTGGA TGGCCAGTGC  AAGGAGCCGC TGGGGCCCAC CACCATGGGC CTCATCTACG TGAACCCGGA GGGTCCGATG GGCGTGCCCG ACCCTGCGCT GTCGGTGCAC GACGTGCGCG ACACATTCGA GCGCATGGGC  ATGAACGACC GCGAGACGGT GGCGCTCATC GGCGGCGGCC ACGCCTTCGG TAAGACGCAC GGCGCGTGCC CGACGGGCCC CGGCCCCGAT CCGACGCAGG ACCCATTGAG CCCGTGGCCG  GGCACCTGCG GCGAGGGCGC CATGAAGGGC AAGGGCAACA ACACCTTCAC GAGCGGCTTC GAGGGCGCGT GGTCGTTCAC GCCCACGCAG TGGGGCAACG GCTACTTCAA GGGCCTCACC  GGCCTGGAAT GGGAGAAGTT CGACGGCCCG GGTGGCCACG TGCAGTGGCG CCCCGTGCCG GACACGACGC CGCCCGTGCG CATGCTGACG GCCGATATCG CGCTGCTGCA CGACGCGAGC  TACCACAACA TCTCGCTCGA GTTCGCGTCC AACCTGACCG CTCTGAACGA GGAGTTCTCG CACGCGTGGT ACAAGCTGAT GTCGCGCGAT CTGGGCCCCG TGGCTCGCTG CCGCGGCAAC  GATGTGCCTC CTGCTCAGCC GTTCCAGAAC CCGCTGCCGG CGACGCCTGG TAGCCTGCCG GACTTTGACG CCGTGCGCTC GGACATCCGC TCGCTGCTGA CCAAGTCGGT GGACGGTCTC  ACGAGCGACT CGAGCAGCGA CGGCACGCCG TACAACGGCG CTCTGTTCGT GCACGCCGCG TGGCAGTGCG CGTCGACGTT CCGCATCACG GACTACGCGG GCGGCTGCAA CGGCGCCAAG  ATCCGCTTCT CGCCGCAGAA GGACTGGCCG GTGAACGCTG GCGTGGACAA GATCATCTCC GCGCTGGAGC CCGTGAAGGA GTCGTACCCG ACGCTGTCGA CGGCCGACCT GATCGTGCTG  GCGGGCCAGG TGGCTCTGGA GGACGCCGGC AACGTGACCA TCGACTTCCT GGGCGGCCGC ACGGACGCTG AGAACGGCAA CGGCGACGAG ATTTTGGCGC CGCGCGAGTA CTACAACACG  ACGCTGATCG CCGTGCGCGA CAACATCAGG ATCCTGGGTG TGTCGCCGTA CGAGGCAGTG GCCCTGGCTG GCCGTCCGCG CAGCGTGGAG CAGCAGAAGG CGCTGGGCTA TAGCGGCTCG  TACAGCAACA ACTCGCTCAC GCTCTCAAAC GAGTACTTCC AGGTGCTCCT GAACGAGACG TGGACGGAGG TGTCTGCGGC GGAGTACCAG GCGGAGGGCA AGAACGTGTT CATGCTGGAC  ACGGACCTGG CGCTGCTGGC GGCTCCCGAG CTGAAGGAGG CGGTGCAGCT GTTCGCCTCG GAGGAGAACG TCTTCAAGGC TGTGTTCTCT TCGGCCTGGG CCAAGGTCAT GGCGGCCGAC 
CACTTCAACG CGACCAGCTA CTAA 

Retrieve as FASTA