Entry information : HaraCP01 (HPar_805014)
Entry ID 8385
Creation 2011-05-17 (Christophe Dunand)
Last sequence changes 2011-05-18 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2014-03-03 (Christophe Dunand)
Peroxidase information: HaraCP01 (HPar_805014)
Name (synonym) HaraCP01 (HPar_805014)
Class Catalase peroxidase    [Orthogroup: CP002]
Taxonomy Eukaryota Peronosporaceae Hyaloperonospora
Organism Hyaloperonospora arabidopsidis    [TaxId: 272952 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaraCP01
start..stop
S start..stop
HaraCP02 1278 0 1..687 1..687
PsojCP03 1102 0 1..687 1..687
PcapCP02 1098 0 1..687 1..687
PiCP01 1098 0 1..687 1..690
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 90619..92682 2064  
join(90619..92682)


exon

Literature and cross-references HaraCP01 (HPar_805014)
Literature Tyler,B., Beynon,J., Baxter,L., McDowell,J., Tripathy,S. Draft sequence assembly of the Hyaloperonospora parasitica genome. (unpublished since 2008).
DNA ref. GenBank:   ABWE01000009.1 (90619..92682)
Protein sequence: HaraCP01 (HPar_805014)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   687 (666)
PWM (Da):   %s   73909.96 (71640.7)  
PI (pH):   %s   5.55 (5.21) Peptide Signal:   %s   cut: 22 range:22-687
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNLRLITFIA ALATRSSTTH AGKCPFGFDE VASVKEQERQ ISSELYSSTS CDVIDYDLVK QDLEKLMTDS QAFWPADFGH YGGLFIRLAW HCSGSYRRSD GRGGCDGARI RFLPEHSWAD  NTNLDKALRL LEPIKAKYGV SLSWGDLIVL SGNVAIKSVG GPVLGFCGGR RDDADGASSL QLGPTPKQEV VAPCAVTGQC EEPLGPTTTG LIYVNPEGPL GKPDPAGSAL EVRDTFARMS  MNDRETVALI GGGHAIGKTH GACLTGPGPS PLEDPRNPWP GTCDEGEMKG KGNNTFTSGF EGAWTSTPTK WGNEYFRSLT TLTWEKYVGP GGHVQWRPVP DTPVPIRMLT ADIALVNDAI  YHKLSLEFAA DQAALDDAFA HAWYKLTSRD MGPVARCRGN DVPPAQPFQN PLPPTPATLA DFSAVRCDIR DLLKKSVVGL PSDLTSDGTP YNGALFVHAA WQCASSFRVT DYAGGCNGAK  IRFSPQIDWP VNAGVDKIIA ALEPIKAKYA TLSTADLIVL AGQVALEDSA GIKIDFLGGR TDGQSGKGDE ILVPRDYYPS VLAGVLDNIK ILGVSPEEAV ALAGRPRSVE QQKVLGYSGS 
YSCNSVTFSN EYFKVLLNEK WIQAGSNEFR ADGNEVYMMS TDVALLYAPE LKKAVKRFAN DEALFKKVFA SAWAKVMMAD HFNASSY 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). No EST available.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAATCTCC GTCTCATCAC CTTCATCGCT GCACTCGCCA CTCGTTCCTC TACAACTCAC GCTGGGAAGT GCCCCTTTGG TTTCGATGAA GTCGCAAGTG TGAAAGAGCA AGAGCGTCAG  ATCTCCAGCG AGCTCTATAG CTCCACGAGC TGTGACGTGA TCGACTATGA CCTGGTCAAA CAGGATCTGG AGAAACTCAT GACCGACTCG CAAGCCTTCT GGCCCGCAGA CTTTGGCCAT  TACGGCGGTC TCTTCATCCG TCTCGCGTGG CACTGCAGTG GGTCCTACCG CCGATCGGAC GGACGTGGAG GTTGTGACGG TGCTCGCATC CGCTTCCTCC CGGAGCATAG CTGGGCGGAC  AATACGAACT TGGACAAAGC TCTTCGTCTC TTGGAGCCCA TTAAGGCCAA GTACGGCGTT TCCTTGTCCT GGGGTGACCT CATTGTCTTA TCGGGTAACG TGGCCATCAA GAGTGTCGGT  GGTCCCGTGC TCGGCTTTTG TGGGGGTCGT CGGGACGACG CCGATGGAGC CAGCAGCTTG CAGCTTGGTC CAACACCAAA GCAAGAAGTC GTTGCGCCTT GTGCCGTGAC GGGGCAGTGT  GAGGAACCAT TAGGCCCTAC TACTACGGGG CTTATCTACG TGAACCCCGA GGGTCCACTG GGCAAGCCAG ACCCGGCTGG ATCCGCTCTG GAAGTGCGTG ACACGTTCGC TCGAATGAGC  ATGAACGACC GCGAGACAGT AGCTCTCATT GGTGGTGGAC ACGCTATTGG CAAGACACAC GGTGCCTGTC TAACCGGTCC TGGTCCGTCT CCGCTCGAGG ATCCTAGGAA CCCGTGGCCG  GGAACCTGTG ACGAAGGCGA GATGAAGGGC AAGGGGAACA ACACGTTCAC TAGTGGGTTC GAGGGTGCGT GGACGTCAAC CCCGACCAAA TGGGGCAATG AGTACTTTAG GAGCCTCACG  ACATTAACAT GGGAGAAGTA TGTCGGACCA GGAGGTCATG TGCAGTGGCG CCCCGTGCCG GACACACCTG TACCTATTCG GATGCTCACG GCCGATATCG CACTGGTGAA CGACGCGATC  TACCACAAGC TTTCGCTCGA ATTCGCTGCT GACCAAGCAG CATTGGACGA CGCCTTTGCC CACGCCTGGT ACAAGTTGAC GTCACGTGAT ATGGGTCCCG TGGCTCGATG CCGTGGCAAC  GACGTGCCCC CTGCGCAGCC GTTCCAAAAC CCACTACCAC CGACACCTGC AACTTTGGCG GATTTCAGTG CTGTGCGTTG TGACATTCGT GATCTGCTGA AGAAGTCGGT AGTCGGTCTA  CCGAGCGACT TGACCAGCGA TGGAACGCCG TATAACGGTG CTTTGTTTGT GCATGCAGCA TGGCAGTGTG CATCATCGTT TCGTGTCACC GACTACGCTG GTGGCTGCAA CGGCGCCAAG  ATCCGATTCT CGCCGCAGAT AGACTGGCCT GTGAACGCTG GCGTTGACAA GATCATTGCT GCGCTAGAGC CGATCAAGGC GAAGTACGCG ACGCTCTCGA CTGCTGATCT GATTGTGCTG  GCAGGACAAG TGGCGCTGGA AGACAGTGCG GGCATTAAAA TCGACTTCTT GGGTGGTCGC ACGGACGGTC AGAGTGGCAA GGGGGATGAG ATTCTAGTCC CGCGTGACTA CTACCCTTCG  GTTCTGGCCG GTGTGCTCGA TAACATCAAG ATCCTGGGTG TGTCGCCGGA AGAGGCCGTC GCTCTGGCTG GACGACCGCG CAGTGTAGAG CAGCAGAAGG TACTTGGCTA CAGTGGCTCG  TACTCTTGCA ACTCGGTCAC TTTCTCAAAC GAGTACTTCA AGGTCCTGCT GAACGAGAAG TGGATCCAGG CGGGCTCGAA CGAGTTCAGG GCTGATGGCA ACGAAGTTTA CATGATGTCT  ACGGATGTGG CACTGCTGTA CGCGCCTGAG CTCAAGAAGG CCGTGAAACG GTTTGCCAAT GACGAGGCAT TGTTCAAGAA GGTCTTTGCA TCGGCCTGGG CCAAGGTCAT GATGGCCGAC 
CACTTCAACG CCAGCAGCTA TTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAATCTCC GTCTCATCAC CTTCATCGCT GCACTCGCCA CTCGTTCCTC TACAACTCAC GCTGGGAAGT GCCCCTTTGG TTTCGATGAA GTCGCAAGTG TGAAAGAGCA AGAGCGTCAG  ATCTCCAGCG AGCTCTATAG CTCCACGAGC TGTGACGTGA TCGACTATGA CCTGGTCAAA CAGGATCTGG AGAAACTCAT GACCGACTCG CAAGCCTTCT GGCCCGCAGA CTTTGGCCAT  TACGGCGGTC TCTTCATCCG TCTCGCGTGG CACTGCAGTG GGTCCTACCG CCGATCGGAC GGACGTGGAG GTTGTGACGG TGCTCGCATC CGCTTCCTCC CGGAGCATAG CTGGGCGGAC  AATACGAACT TGGACAAAGC TCTTCGTCTC TTGGAGCCCA TTAAGGCCAA GTACGGCGTT TCCTTGTCCT GGGGTGACCT CATTGTCTTA TCGGGTAACG TGGCCATCAA GAGTGTCGGT  GGTCCCGTGC TCGGCTTTTG TGGGGGTCGT CGGGACGACG CCGATGGAGC CAGCAGCTTG CAGCTTGGTC CAACACCAAA GCAAGAAGTC GTTGCGCCTT GTGCCGTGAC GGGGCAGTGT  GAGGAACCAT TAGGCCCTAC TACTACGGGG CTTATCTACG TGAACCCCGA GGGTCCACTG GGCAAGCCAG ACCCGGCTGG ATCCGCTCTG GAAGTGCGTG ACACGTTCGC TCGAATGAGC  ATGAACGACC GCGAGACAGT AGCTCTCATT GGTGGTGGAC ACGCTATTGG CAAGACACAC GGTGCCTGTC TAACCGGTCC TGGTCCGTCT CCGCTCGAGG ATCCTAGGAA CCCGTGGCCG  GGAACCTGTG ACGAAGGCGA GATGAAGGGC AAGGGGAACA ACACGTTCAC TAGTGGGTTC GAGGGTGCGT GGACGTCAAC CCCGACCAAA TGGGGCAATG AGTACTTTAG GAGCCTCACG  ACATTAACAT GGGAGAAGTA TGTCGGACCA GGAGGTCATG TGCAGTGGCG CCCCGTGCCG GACACACCTG TACCTATTCG GATGCTCACG GCCGATATCG CACTGGTGAA CGACGCGATC  TACCACAAGC TTTCGCTCGA ATTCGCTGCT GACCAAGCAG CATTGGACGA CGCCTTTGCC CACGCCTGGT ACAAGTTGAC GTCACGTGAT ATGGGTCCCG TGGCTCGATG CCGTGGCAAC  GACGTGCCCC CTGCGCAGCC GTTCCAAAAC CCACTACCAC CGACACCTGC AACTTTGGCG GATTTCAGTG CTGTGCGTTG TGACATTCGT GATCTGCTGA AGAAGTCGGT AGTCGGTCTA  CCGAGCGACT TGACCAGCGA TGGAACGCCG TATAACGGTG CTTTGTTTGT GCATGCAGCA TGGCAGTGTG CATCATCGTT TCGTGTCACC GACTACGCTG GTGGCTGCAA CGGCGCCAAG  ATCCGATTCT CGCCGCAGAT AGACTGGCCT GTGAACGCTG GCGTTGACAA GATCATTGCT GCGCTAGAGC CGATCAAGGC GAAGTACGCG ACGCTCTCGA CTGCTGATCT GATTGTGCTG  GCAGGACAAG TGGCGCTGGA AGACAGTGCG GGCATTAAAA TCGACTTCTT GGGTGGTCGC ACGGACGGTC AGAGTGGCAA GGGGGATGAG ATTCTAGTCC CGCGTGACTA CTACCCTTCG  GTTCTGGCCG GTGTGCTCGA TAACATCAAG ATCCTGGGTG TGTCGCCGGA AGAGGCCGTC GCTCTGGCTG GACGACCGCG CAGTGTAGAG CAGCAGAAGG TACTTGGCTA CAGTGGCTCG  TACTCTTGCA ACTCGGTCAC TTTCTCAAAC GAGTACTTCA AGGTCCTGCT GAACGAGAAG TGGATCCAGG CGGGCTCGAA CGAGTTCAGG GCTGATGGCA ACGAAGTTTA CATGATGTCT  ACGGATGTGG CACTGCTGTA CGCGCCTGAG CTCAAGAAGG CCGTGAAACG GTTTGCCAAT GACGAGGCAT TGTTCAAGAA GGTCTTTGCA TCGGCCTGGG CCAAGGTCAT GATGGCCGAC 
CACTTCAACG CCAGCAGCTA TTGA 

Retrieve as FASTA