Entry information : MtAPx[P]11 (Medtr5g008330.1[4.0] / Medtr5g008400.1[3.0])
Entry ID 8460
Creation 2011-08-10 (Qiang Li)
Last sequence changes 2011-12-08 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Catherine Mathe
Last annotation changes 2016-05-09 (Catherine Mathe)
Peroxidase information: MtAPx[P]11 (Medtr5g008330.1[4.0] / Medtr5g008400.1[3.0])
Name (synonym) MtAPx[P]11 (Medtr5g008330.1[4.0] / Medtr5g008400.1[3.0])
Class Ascorbate peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MtAPx[P]11
start..stop
S start..stop
MtAPx07-A 74 2e-18 1..40 77..116
MtAPx07-B 74 3e-18 1..40 77..116
VuAPx03-2 61 0.0000000000001 1..40 50..93
VuAPx03-1 61 0.0000000000001 1..40 50..93
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1752293..1752412 120  
complement(join(1752293..1752412))


exon

Literature and cross-references MtAPx[P]11 (Medtr5g008330.1[4.0] / Medtr5g008400.1[3.0])
DNA ref. Phytozome 12:   chr5 (1752412..1752293)
Cluster/Prediction ref. Phytozome Gene 12:   31090403
Protein sequence: MtAPx[P]11 (Medtr5g008330.1[4.0] / Medtr5g008400.1[3.0])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   39
PWM (Da):   %s   4303.32  
PI (pH):   %s   10.48
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

QR*GKVRVSS GRFGTVAFES DPDQLKSARE DIKELLRTKF 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CAGCGATGAG GAAAAGTTCG TGTTTCGAGT GGACGATTCG GAACGGTTGC GTTTGAGTCT GATCCTGATC AGTTGAAAAG TGCTAGAGAA GATATCAAGG AGCTTCTTAG GACTAAGTTC 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CAGCGATGAG GAAAAGTTCG TGTTTCGAGT GGACGATTCG GAACGGTTGC GTTTGAGTCT GATCCTGATC AGTTGAAAAG TGCTAGAGAA GATATCAAGG AGCTTCTTAG GACTAAGTTC 

Retrieve as FASTA