Entry information : RcoPrx11 (RcPOX7 / RcPrx7)
Entry ID 8556
Creation 2011-02-24 (Christophe Dunand)
Last sequence changes 2015-11-09 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-09 (Achraf Jemmat)
Peroxidase information: RcoPrx11 (RcPOX7 / RcPrx7)
Name (synonym) RcoPrx11 (RcPOX7 / RcPrx7)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Rubiaceae Rubia
Organism Rubia cordifolia    [TaxId: 339321 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RcoPrx11
start..stop
S start..stop
CroPrx03-1A_other 529 0 26..337 34..344
CroPrx03-1A 527 0 26..337 34..344
CroPrx03-1B_Other 525 0 26..337 29..339
CroPrx03-1B 524 0 26..337 29..339
Literature and cross-references RcoPrx11 (RcPOX7 / RcPrx7)
Literature Veremeichik,G.N., Shkryl,Y.N., Bulgakov,V.P., Avramenko,T.V. and Zhuravlev,Y.N. Molecular cloning and characterization of seven class III peroxidases induced by overexpression of the agrobacterial rolB gene in Rubia cordifolia transgenic callus cultures. Plant Cell Rep. 31 (6), 1009-1019 (2012)
mRNA ref. GenBank:   HM807274.1
Protein sequence: RcoPrx11 (RcPOX7 / RcPrx7)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   354 (326)
PWM (Da):   %s   38545.45 (35570.7)  
PI (pH):   %s   7.12 (6.76) Peptide Signal:   %s   cut: 29 range:29-354
Sequence
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Send to Peroxiscan
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MSLSTISLRS LLLLSLLSLH VSLNAIQAQT YPPLVNGLSW TFHDFDCPNL ESIITNRLRQ VFQNDIGQAA GLLRLHFHDC FVQGCDASVL LVGSASGPSE QAAPPNLSLR QQAFRIIEDL  RNRVHRQCGR VVSCADITAL AARDAIVLSG GPAYEVPLGR RDGTTFATRN ETLRNLPAPT SNTSVLLTSL ATNQNLNATD LVALSGGHTI GIGHCTSFEG RLFPARDPTM DQTFFNNLRG 
TCPALNTTNT TVLDIRSPNV FDNRYYVDLM NRQGLFTSDQ DMYTDSRTRG IITSFAVNQT LFFEKFVYSM TKMGQLNVLT GTRGEIRANC SVRNSGNDFL SLVVESQGGD LSGF 

Retrieve as FASTA  
Remarks
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCTTTGA GCACCATTTC CCTAAGGTCT CTTCTGCTAT TGTCACTACT CTCCCTCCAT GTTTCTCTGA ATGCTATCCA AGCTCAAACT TATCCACCTT TAGTGAACGG ACTCTCATGG  ACTTTCCACG ATTTCGACTG CCCCAATTTG GAATCAATCA TCACAAATCG GCTCCGGCAA GTGTTTCAAA ACGATATCGG CCAAGCTGCC GGCTTGCTCC GCCTTCACTT CCACGATTGC  TTTGTTCAGG GATGCGATGC TTCGGTGCTG CTGGTAGGAT CGGCGAGTGG GCCGTCGGAA CAGGCAGCGC CGCCCAACCT GAGTTTGCGG CAGCAGGCGT TTAGGATCAT CGAGGATCTT  CGGAACCGTG TGCACCGGCA GTGCGGTAGA GTTGTGTCAT GTGCCGACAT TACTGCTTTG GCTGCCCGGG ATGCAATTGT GCTATCTGGA GGACCGGCAT ACGAGGTGCC ACTAGGAAGA  AGGGACGGAA CTACATTTGC CACAAGAAAC GAAACCCTAC GTAACCTTCC CGCACCGACG AGCAACACCA GCGTCCTCCT AACCTCACTG GCAACCAACC AGAACCTGAA CGCCACCGAC  TTAGTCGCGC TCTCCGGGGG CCACACCATC GGCATCGGCC ACTGCACCTC CTTCGAAGGA CGGCTCTTCC CGGCCCGCGA TCCGACCATG GACCAGACCT TCTTCAACAA CCTCAGAGGA  ACTTGTCCCG CACTCAACAC CACCAACACC ACGGTTCTCG ACATCCGGAG CCCCAACGTG TTCGATAACC GCTACTACGT TGATCTAATG AACCGACAGG GGCTCTTCAC CTCGGACCAG  GACATGTACA CGGATTCGAG GACCCGGGGG ATCATAACGA GTTTCGCGGT CAATCAGACG CTCTTCTTCG AGAAGTTTGT GTATTCTATG ACTAAGATGG GGCAGCTCAA CGTGTTGACC 
GGGACCAGAG GTGAAATCAG GGCTAACTGC TCTGTTAGAA ATTCGGGTAA TGATTTCTTG TCATTGGTGG TTGAAAGCCA GGGAGGAGAC TTATCAGGGT TTTAG 

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cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TACCAACCCA GAGTACGGGG GGATCACATG CATAGTCAGC CCTACCAGTC AATATGTCTT TGAGCACCAT TTCCCTAAGG TCTCTTCTGC TATTGTCACT ACTCTCCCTC CATGTTTCTC  TGAATGCTAT CCAAGCTCAA ACTTATCCAC CTTTAGTGAA CGGACTCTCA TGGACTTTCC ACGATTTCGA CTGCCCCAAT TTGGAATCAA TCATCACAAA TCGGCTCCGG CAAGTGTTTC  AAAACGATAT CGGCCAAGCT GCCGGCTTGC TCCGCCTTCA CTTCCACGAT TGCTTTGTTC AGGGATGCGA TGCTTCGGTG CTGCTGGTAG GATCGGCGAG TGGGCCGTCG GAACAGGCAG  CGCCGCCCAA CCTGAGTTTG CGGCAGCAGG CGTTTAGGAT CATCGAGGAT CTTCGGAACC GTGTGCACCG GCAGTGCGGT AGAGTTGTGT CATGTGCCGA CATTACTGCT TTGGCTGCCC  GGGATGCAAT TGTGCTATCT GGAGGACCGG CATACGAGGT GCCACTAGGA AGAAGGGACG GAACTACATT TGCCACAAGA AACGAAACCC TACGTAACCT TCCCGCACCG ACGAGCAACA  CCAGCGTCCT CCTAACCTCA CTGGCAACCA ACCAGAACCT GAACGCCACC GACTTAGTCG CGCTCTCCGG GGGCCACACC ATCGGCATCG GCCACTGCAC CTCCTTCGAA GGACGGCTCT  TCCCGGCCCG CGATCCGACC ATGGACCAGA CCTTCTTCAA CAACCTCAGA GGAACTTGTC CCGCACTCAA CACCACCAAC ACCACGGTTC TCGACATCCG GAGCCCCAAC GTGTTCGATA  ACCGCTACTA CGTTGATCTA ATGAACCGAC AGGGGCTCTT CACCTCGGAC CAGGACATGT ACACGGATTC GAGGACCCGG GGGATCATAA CGAGTTTCGC GGTCAATCAG ACGCTCTTCT  TCGAGAAGTT TGTGTATTCT ATGACTAAGA TGGGGCAGCT CAACGTGTTG ACCGGGACCA GAGGTGAAAT CAGGGCTAAC TGCTCTGTTA GAAATTCGGG TAATGATTTC TTGTCATTGG  TGGTTGAAAG CCAGGGAGGA GACTTATCAG GGTTTTAGCC TTTTGACTTT AGAGAGTTGG AAAATGGATC ATCTGTGTGA CTGTGTGTTC TTCTTTTTCT ACCATTTTAT GTTTGGGGTT 
GTTGGCACGG GAGTATCATT TTTAACTTTT GGTGTGGCTT GTTCTGCCTG GTAATAAATG TTATCAAAAA AAAAAAAAAA AAAAAAAAAA AAA 

Retrieve as FASTA