Entry information : AcoPrx03 (AcoGoldSmith_v1.006018m)
Entry ID 8572
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-11-18 (Christophe Dunand)
Peroxidase information: AcoPrx03 (AcoGoldSmith_v1.006018m)
Name (synonym) AcoPrx03 (AcoGoldSmith_v1.006018m)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Ranunculaceae Aquilegia
Organism Aquilegia coerulea     [TaxId: 218851 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AcoPrx03
start..stop
S start..stop
AfpPrx10 687 0 1..331 1..331
VvPrx25 479 4e-172 19..329 17..327
VvPrx24 471 7e-169 20..325 18..323
CclPrx36 459 6e-164 1..325 1..327
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2798237..2799232 996  
join(2798237..2799232)


exon

Literature and cross-references AcoPrx03 (AcoGoldSmith_v1.006018m)
DNA ref. Phytozome 12:   scaffold_2 (2798237..2799232)
Protein sequence: AcoPrx03 (AcoGoldSmith_v1.006018m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332 (311)
PWM (Da):   %s   36946.72 (34743.5)  
PI (pH):   %s   8.84 (8.84) Peptide Signal:   %s   cut: 21 range:21-331
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAVPLLLSIV LVFSLTSFSA ESRLSTTYYS RKCPRFQQIV LDTITNKQIT SPTTAAGTLR LFFHDCMIEG CDASVLISSN SFNTAERDAD INHSLPGDAF DVVVRAKIAL ELECPGIVSC  SDILALATRD LVTMVGGPFY QVYLGRKDGF ISKATNVEGK LPKSTMGMNE IINLFTAKGF SIQEMVALSG AHTIGFSHCK EFANRLFNYS KYSSVDPTLN PRYADGLKRA CANYKSNPEI 
STFNDLMTPN KFDNKYYQNL PRGLGLLATD RAMIEDLRTR PFALKYAYNQ TVFFEDFARA MQKLSLVGVK QGRWGEIRRR CDAFNYIKTS N* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). Extra 5' end has been removed.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGTAC CTTTACTTCT AAGTATTGTT CTAGTATTTT CTCTTACTTC ATTTTCAGCT GAATCAAGAC TATCTACAAC TTATTACTCA AGAAAATGCC CAAGATTTCA ACAAATTGTT  CTAGACACTA TTACAAACAA GCAAATCACT AGTCCCACAA CTGCAGCAGG CACACTTCGT TTATTTTTTC ATGATTGTAT GATTGAAGGC TGTGATGCAT CAGTTTTAAT TTCATCAAAC  AGTTTCAATA CAGCTGAACG TGATGCAGAT ATCAATCATT CTTTACCTGG GGATGCTTTT GATGTTGTTG TTAGAGCTAA AATTGCTCTT GAACTTGAAT GTCCAGGTAT AGTCTCTTGT  TCAGATATAC TAGCACTTGC TACTCGTGAT CTTGTTACTA TGGTTGGTGG TCCTTTTTAT CAAGTTTATT TAGGTAGAAA AGATGGGTTT ATTTCAAAAG CTACAAATGT TGAAGGAAAG  TTACCAAAAT CAACAATGGG TATGAATGAA ATCATCAATT TGTTTACTGC AAAAGGGTTT TCTATACAAG AAATGGTAGC TTTAAGTGGT GCTCATACTA TTGGGTTTTC TCATTGTAAA  GAGTTTGCAA ATAGACTCTT TAATTACAGT AAATATTCTT CAGTTGATCC TACATTAAAC CCAAGGTATG CAGATGGATT GAAAAGAGCT TGTGCTAACT ACAAATCAAA TCCAGAAATA  TCGACATTCA ATGATTTGAT GACACCAAAT AAATTTGATA ACAAGTATTA TCAAAATTTG CCGAGGGGAT TAGGATTATT GGCAACAGAT CGAGCTATGA TTGAAGATTT AAGAACAAGA  CCATTTGCAT TGAAATATGC ATATAATCAA ACTGTGTTCT TTGAGGATTT TGCTAGAGCA ATGCAGAAGC TTAGTTTAGT TGGAGTTAAA CAAGGAAGAT GGGGTGAGAT TAGACGTAGA 
TGTGATGCTT TTAATTATAT TAAGACTAGT AATTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGTAC CTTTACTTCT AAGTATTGTT CTAGTATTTT CTCTTACTTC ATTTTCAGCT GAATCAAGAC TATCTACAAC TTATTACTCA AGAAAATGCC CAAGATTTCA ACAAATTGTT  CTAGACACTA TTACAAACAA GCAAATCACT AGTCCCACAA CTGCAGCAGG CACACTTCGT TTATTTTTTC ATGATTGTAT GATTGAAGGC TGTGATGCAT CAGTTTTAAT TTCATCAAAC  AGTTTCAATA CAGCTGAACG TGATGCAGAT ATCAATCATT CTTTACCTGG GGATGCTTTT GATGTTGTTG TTAGAGCTAA AATTGCTCTT GAACTTGAAT GTCCAGGTAT AGTCTCTTGT  TCAGATATAC TAGCACTTGC TACTCGTGAT CTTGTTACTA TGGTTGGTGG TCCTTTTTAT CAAGTTTATT TAGGTAGAAA AGATGGGTTT ATTTCAAAAG CTACAAATGT TGAAGGAAAG  TTACCAAAAT CAACAATGGG TATGAATGAA ATCATCAATT TGTTTACTGC AAAAGGGTTT TCTATACAAG AAATGGTAGC TTTAAGTGGT GCTCATACTA TTGGGTTTTC TCATTGTAAA  GAGTTTGCAA ATAGACTCTT TAATTACAGT AAATATTCTT CAGTTGATCC TACATTAAAC CCAAGGTATG CAGATGGATT GAAAAGAGCT TGTGCTAACT ACAAATCAAA TCCAGAAATA  TCGACATTCA ATGATTTGAT GACACCAAAT AAATTTGATA ACAAGTATTA TCAAAATTTG CCGAGGGGAT TAGGATTATT GGCAACAGAT CGAGCTATGA TTGAAGATTT AAGAACAAGA  CCATTTGCAT TGAAATATGC ATATAATCAA ACTGTGTTCT TTGAGGATTT TGCTAGAGCA ATGCAGAAGC TTAGTTTAGT TGGAGTTAAA CAAGGAAGAT GGGGTGAGAT TAGACGTAGA 
TGTGATGCTT TTAATTATAT TAAGACTAGT AATTAA 

Retrieve as FASTA