Entry information : AcoPrx70 (AcoGoldSmith_v1.019491m)
Entry ID 8618
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-12-14 (Qiang Li)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2011-12-14 (Qiang Li)
Peroxidase information: AcoPrx70 (AcoGoldSmith_v1.019491m)
Name (synonym) AcoPrx70 (AcoGoldSmith_v1.019491m)
Class Class III peroxidase     [Orthogroup: Prx104]*
Taxonomy Eukaryota Viridiplantae Streptophyta Ranunculaceae Aquilegia
Organism Aquilegia coerulea     [TaxId: 218851 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AcoPrx70
start..stop
S start..stop
AcoPrx65 325 2e-114 1..157 159..315
AcoPrx72 310 1e-108 1..157 162..319
AcoPrx[P]81 307 4e-107 1..157 160..317
AcoPrx106 306 7e-107 1..157 162..319
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 10125..10595 471  
join(10125..10595)


exon

Literature and cross-references AcoPrx70 (AcoGoldSmith_v1.019491m)
DNA ref. Phytozome 12:   scaffold_296 (10125..10595)
Protein sequence: AcoPrx70 (AcoGoldSmith_v1.019491m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   157
PWM (Da):   %s   17023.43  
PI (pH):   %s   10.07
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
LPAFFHDLRT IIDIFQRKGF SEREMVALSG AHSIGQARCS SFRDRIYSNT SNIDPAFAVS RKATCPRSGG DGNLAPLDPQ SPGRFGNNYF QALMNRRGLL NSDQVLFNGG STDSIVRTYA 
NAASAFSTDF MNAMVKMGNL SPLTGKGEIR TTCQRVN 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from phytozome (5' end is missing).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CTTCCCGCCT TCTTTCATGA TCTTCGAACA ATCATAGATA TATTTCAACG AAAAGGCTTT AGTGAACGAG AAATGGTAGC TTTATCCGGA GCACACTCAA TAGGCCAAGC CCGATGCTCA  TCTTTTAGAG ATCGAATCTA TAGTAATACT AGCAACATCG ATCCTGCGTT TGCAGTGTCT AGGAAGGCTA CTTGTCCTCG TAGTGGTGGA GATGGCAACT TAGCTCCACT AGATCCTCAA  AGCCCAGGTC GTTTTGGTAA CAATTATTTC CAGGCATTGA TGAACAGAAG AGGACTTCTA AACTCTGATC AGGTGTTGTT TAATGGTGGC TCCACTGATT CTATTGTAAG GACATATGCC 
AATGCTGCTA GTGCCTTCTC AACAGATTTC ATGAATGCAA TGGTTAAAAT GGGGAACTTA AGTCCCTTAA CTGGTAAAGG CGAGATACGC ACAACTTGTC AAAGGGTAAA T 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CTTCCCGCCT TCTTTCATGA TCTTCGAACA ATCATAGATA TATTTCAACG AAAAGGCTTT AGTGAACGAG AAATGGTAGC TTTATCCGGA GCACACTCAA TAGGCCAAGC CCGATGCTCA  TCTTTTAGAG ATCGAATCTA TAGTAATACT AGCAACATCG ATCCTGCGTT TGCAGTGTCT AGGAAGGCTA CTTGTCCTCG TAGTGGTGGA GATGGCAACT TAGCTCCACT AGATCCTCAA  AGCCCAGGTC GTTTTGGTAA CAATTATTTC CAGGCATTGA TGAACAGAAG AGGACTTCTA AACTCTGATC AGGTGTTGTT TAATGGTGGC TCCACTGATT CTATTGTAAG GACATATGCC 
AATGCTGCTA GTGCCTTCTC AACAGATTTC ATGAATGCAA TGGTTAAAAT GGGGAACTTA AGTCCCTTAA CTGGTAAAGG CGAGATACGC ACAACTTGTC AAAGGGTAAA T 

Retrieve as FASTA