Entry information : CclPrx36 (clementine0.9_015625m)
Entry ID 8656
Creation 2011-06-25 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-04 (Qiang LI)
Peroxidase information: CclPrx36 (clementine0.9_015625m)
Name (synonym) CclPrx36 (clementine0.9_015625m)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus clementina    [TaxId: 85681 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CclPrx36
start..stop
S start..stop
CsPrx38 616 0 1..306 1..306
PpePrx18 531 0 22..327 21..326
RcPrx41 527 0 1..327 1..320
MePrx33 525 0 1..327 1..319
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1384717..1385700 984  
join(1384717..1385700)


exon

Literature and cross-references CclPrx36 (clementine0.9_015625m)
DNA ref. Phytozome 12:   scaffold_53 (1384717..1385700)
Protein sequence: CclPrx36 (clementine0.9_015625m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (303)
PWM (Da):   %s   36729.42 (34048.0)  
PI (pH):   %s   8.3 (8.36) Peptide Signal:   %s   cut: 25 range:25-327
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTKPQQALCI LIFSFSFLVN LAESRLSIDY YSKSCPRFNQ IMQDTITNKQ ITSPTTAAAT LRLFFHDCLL NGCDSSILIT STPFNKAERD ADINLSLPGD AFDVITRAKT ALELQCPNTV  SCSDILAVAT RDLVTMVGGP YYNVYLGRKD VRVSKAADVE GNLPKPTMPM SQIIDIFAKR KFSVQEMVAL SGAHTIGFSH CNEFSGNIYN YSRIPHYDAH YNPRFAEALQ KACADYQKNP 
TLSVFNDIMS PNKFDNLYYQ NLPKGLGLLE SDHGLFNDPR TKPYVELYAR DQNEFFKAFA RAMEKLSLYG IKTGRRGEIR RRCDAFN 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACAAAAC CTCAGCAAGC TCTCTGCATT CTCATCTTCT CATTCTCATT TCTTGTAAAC CTCGCAGAAT CTAGACTCAG CATCGACTAC TACTCAAAAT CATGCCCAAG ATTCAACCAA  ATCATGCAAG ATACAATCAC CAACAAGCAA ATCACAAGCC CCACCACCGC CGCTGCCACC CTCCGCCTCT TCTTCCACGA CTGTCTCCTC AACGGCTGCG ACTCCTCCAT CCTCATAACC  TCAACCCCCT TCAACAAGGC CGAGCGTGAT GCTGACATCA ATCTCTCCCT CCCCGGCGAC GCATTTGACG TCATCACCCG TGCGAAGACA GCCCTTGAGC TTCAGTGTCC CAACACTGTC  TCCTGCTCCG ACATCCTCGC CGTTGCCACT CGTGATCTGG TCACAATGGT GGGTGGCCCG TATTACAATG TCTATTTGGG CCGTAAAGAT GTGAGGGTCT CAAAAGCCGC TGATGTTGAA  GGGAACCTTC CAAAGCCAAC CATGCCCATG TCACAGATTA TTGATATATT TGCAAAAAGA AAATTTTCAG TTCAAGAAAT GGTGGCTCTG AGTGGTGCTC ACACTATTGG ATTCTCTCAT  TGCAACGAAT TTAGTGGTAA TATTTATAAT TACAGCAGGA TACCTCACTA TGATGCTCAT TATAATCCAA GATTTGCCGA GGCTTTGCAG AAGGCTTGCG CTGATTATCA AAAGAACCCT  ACTTTGTCTG TGTTCAATGA TATTATGAGT CCCAACAAGT TTGATAACTT GTACTATCAA AATCTGCCTA AAGGGTTGGG GCTTTTGGAG TCAGATCATG GGTTGTTTAA TGATCCAAGA  ACAAAGCCTT ATGTGGAGCT TTATGCGAGA GATCAAAATG AGTTCTTTAA GGCTTTTGCT AGAGCTATGG AGAAGCTTAG TCTTTATGGT ATTAAGACTG GAAGAAGAGG AGAGATTAGG 
CGCAGGTGTG ATGCTTTTAA CTAA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACAAAAC CTCAGCAAGC TCTCTGCATT CTCATCTTCT CATTCTCATT TCTTGTAAAC CTCGCAGAAT CTAGACTCAG CATCGACTAC TACTCAAAAT CATGCCCAAG ATTCAACCAA  ATCATGCAAG ATACAATCAC CAACAAGCAA ATCACAAGCC CCACCACCGC CGCTGCCACC CTCCGCCTCT TCTTCCACGA CTGTCTCCTC AACGGCTGCG ACTCCTCCAT CCTCATAACC  TCAACCCCCT TCAACAAGGC CGAGCGTGAT GCTGACATCA ATCTCTCCCT CCCCGGCGAC GCATTTGACG TCATCACCCG TGCGAAGACA GCCCTTGAGC TTCAGTGTCC CAACACTGTC  TCCTGCTCCG ACATCCTCGC CGTTGCCACT CGTGATCTGG TCACAATGGT GGGTGGCCCG TATTACAATG TCTATTTGGG CCGTAAAGAT GTGAGGGTCT CAAAAGCCGC TGATGTTGAA  GGGAACCTTC CAAAGCCAAC CATGCCCATG TCACAGATTA TTGATATATT TGCAAAAAGA AAATTTTCAG TTCAAGAAAT GGTGGCTCTG AGTGGTGCTC ACACTATTGG ATTCTCTCAT  TGCAACGAAT TTAGTGGTAA TATTTATAAT TACAGCAGGA TACCTCACTA TGATGCTCAT TATAATCCAA GATTTGCCGA GGCTTTGCAG AAGGCTTGCG CTGATTATCA AAAGAACCCT  ACTTTGTCTG TGTTCAATGA TATTATGAGT CCCAACAAGT TTGATAACTT GTACTATCAA AATCTGCCTA AAGGGTTGGG GCTTTTGGAG TCAGATCATG GGTTGTTTAA TGATCCAAGA  ACAAAGCCTT ATGTGGAGCT TTATGCGAGA GATCAAAATG AGTTCTTTAA GGCTTTTGCT AGAGCTATGG AGAAGCTTAG TCTTTATGGT ATTAAGACTG GAAGAAGAGG AGAGATTAGG 
CGCAGGTGTG ATGCTTTTAA CTAA 

Retrieve as FASTA