Entry information : CpapPrx12 (CpPOD6 / evm.model.supercontig_161.43)
Entry ID 8746
Creation 2011-06-28 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-08-16 (Christophe Dunand)
Peroxidase information: CpapPrx12 (CpPOD6 / evm.model.supercontig_161.43)
Name (synonym) CpapPrx12 (CpPOD6 / evm.model.supercontig_161.43)
Class Class III peroxidase    [Orthogroup: Prx018]
Taxonomy Eukaryota Viridiplantae Streptophyta Caricaceae Carica
Organism Carica papaya    [TaxId: 3649 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CpapPrx12
start..stop
S start..stop
PpePrx32 476 2e-169 9..308 21..316
MePrx102 459 2e-162 1..308 13..316
EcamPrx48 443 4e-156 9..309 22..320
MguPrx50 441 2e-155 9..308 21..321
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 597345..597509 165 N° 2 596011..597159 1149  
complement(join(596011..597159,597345..597509))


exon

Literature and cross-references CpapPrx12 (CpPOD6 / evm.model.supercontig_161.43)
DNA ref. Phytozome 11:   supercontig_161 (597509..596011)
Protein sequence: CpapPrx12 (CpPOD6 / evm.model.supercontig_161.43)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   437
PWM (Da):   %s   47310.8  
PI (pH):   %s   10.56
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVPLKCIRELKVGFYDATCPKAESIVNQIVQKRFTSDPSIVPALLRMHFHDCFVRGCDASILIDSTKEKQSEKDAGPNQTVRGFELIDEAKAALEARCPSIVSCADIITLATRDAVVLAGGPKYTIPTGRRDGLTSDINEVNLPGPQFSVSQALQSFTDKKLNLNEMVTLLGAHTVGVSHCSFFQDRLSNFQGTGQPNPSMDPTLAAKLSKTCSSDTSSGRDPTVFLDQNTSSIFDNQFYKQIVLKKGILQIDQELAMDQSTRNIVLSFASNDVRFKQSFANAMVKMGTIDVLVGNAGEIRQNCRVFNKVAKPSTPPPKGQQFTPPSTQPTKPPPSTPSTKPSPSIPPSKPQPSTPSAKPKPQVPPSKPPPSTPPAKPKPQSPHSKPPASIPITKPKSVKPKNKKKPSKPKDKKKPPKPKDKKKSSKSKSSKPKHRK*

Retrieve as FASTA  
Remarks Complete sequence from genomic with a long 3' tail.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTCCTCTTAAGTGTATCAGAGAGTTAAAGGTTGGGTTCTACGATGCTACGTGTCCAAAAGCGGAATCAATCGTTAACCAAATAGTGCAAAAACGATTCACGTCTGACCCGTCCATT
GTACCCGCTTTACTTCGCATGCATTTTCATGATTGCTTTGTTAGA
GTAAGTTCTCATTTGCCATCTTTTAACATGCATAAACTTATATGAAATCAAAGTATATTAAATAATAAATTGTCT
CCGTATATTTATATACCATGTCATTAAAATGGTTATATAATTAAAATTTTACTAGTAAAGAATTGAATAAATTATTTGTATGATAATAATATATGAAATTATAATTTCAGGGTTGTGATG
CATCTATCTTGATTGACTCAACCAAAGAAAAGCAATCAGAAAAAGATGCAGGACCGAATCAAACTGTGCGTGGATTTGAGCTCATTGACGAGGCTAAGGCAGCCTTAGAGGCTCGATGCC
CTTCAATTGTCTCATGTGCAGACATCATAACACTTGCAACACGAGATGCTGTGGTTTTAGCTGGAGGTCCTAAATACACAATCCCGACAGGAAGACGTGACGGTTTGACTTCTGATATTA
ATGAAGTAAATTTACCAGGACCACAATTTAGTGTGTCTCAGGCATTACAATCTTTTACCGATAAAAAATTAAATCTCAATGAAATGGTGACACTATTAGGTGCACATACAGTTGGTGTCT
CTCATTGCAGTTTCTTTCAAGACCGACTTTCTAATTTCCAAGGCACTGGACAACCTAATCCTTCAATGGACCCTACTTTAGCTGCCAAGCTGAGCAAGACTTGCAGCTCTGACACCTCAT
CTGGAAGGGACCCTACTGTATTTTTGGACCAAAATACATCATCTATTTTTGATAACCAATTTTATAAGCAGATTGTTTTAAAGAAAGGGATATTGCAGATTGATCAAGAGCTTGCCATGG
ATCAATCTACTAGGAATATTGTCTTGAGTTTCGCATCAAACGACGTTAGATTCAAACAAAGTTTTGCAAATGCTATGGTGAAAATGGGAACTATTGATGTTCTTGTGGGTAATGCTGGTG
AAATTAGACAAAATTGTAGAGTTTTTAATAAAGTAGCAAAACCATCAACACCACCTCCCAAGGGTCAACAATTCACACCACCATCAACTCAACCCACCAAGCCACCGCCATCAACTCCAT
CCACCAAGCCATCACCATCAATTCCACCTTCTAAGCCACAACCATCCACCCCATCTGCTAAGCCAAAACCACAAGTTCCACCTTCTAAGCCGCCACCATCAACCCCGCCTGCCAAACCAA
AACCACAAAGCCCACATTCCAAGCCGCCAGCATCAATCCCAATCACCAAACCAAAATCAGTGAAGCCAAAGAATAAAAAGAAACCATCGAAACCAAAAGATAAGAAGAAACCACCAAAGC
CAAAAGATAAGAAAAAATCATCAAAATCAAAGTCATCTAAACCCAAACACAGAAAATGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTCCTCTTAAGTGTATCAGAGAGTTAAAGGTTGGGTTCTACGATGCTACGTGTCCAAAAGCGGAATCAATCGTTAACCAAATAGTGCAAAAACGATTCACGTCTGACCCGTCCATT
GTACCCGCTTTACTTCGCATGCATTTTCATGATTGCTTTGTTAGA
GGTTGTGATGCATCTATCTTGATTGACTCAACCAAAGAAAAGCAATCAGAAAAAGATGCAGGACCGAATCAAACT
GTGCGTGGATTTGAGCTCATTGACGAGGCTAAGGCAGCCTTAGAGGCTCGATGCCCTTCAATTGTCTCATGTGCAGACATCATAACACTTGCAACACGAGATGCTGTGGTTTTAGCTGGA
GGTCCTAAATACACAATCCCGACAGGAAGACGTGACGGTTTGACTTCTGATATTAATGAAGTAAATTTACCAGGACCACAATTTAGTGTGTCTCAGGCATTACAATCTTTTACCGATAAA
AAATTAAATCTCAATGAAATGGTGACACTATTAGGTGCACATACAGTTGGTGTCTCTCATTGCAGTTTCTTTCAAGACCGACTTTCTAATTTCCAAGGCACTGGACAACCTAATCCTTCA
ATGGACCCTACTTTAGCTGCCAAGCTGAGCAAGACTTGCAGCTCTGACACCTCATCTGGAAGGGACCCTACTGTATTTTTGGACCAAAATACATCATCTATTTTTGATAACCAATTTTAT
AAGCAGATTGTTTTAAAGAAAGGGATATTGCAGATTGATCAAGAGCTTGCCATGGATCAATCTACTAGGAATATTGTCTTGAGTTTCGCATCAAACGACGTTAGATTCAAACAAAGTTTT
GCAAATGCTATGGTGAAAATGGGAACTATTGATGTTCTTGTGGGTAATGCTGGTGAAATTAGACAAAATTGTAGAGTTTTTAATAAAGTAGCAAAACCATCAACACCACCTCCCAAGGGT
CAACAATTCACACCACCATCAACTCAACCCACCAAGCCACCGCCATCAACTCCATCCACCAAGCCATCACCATCAATTCCACCTTCTAAGCCACAACCATCCACCCCATCTGCTAAGCCA
AAACCACAAGTTCCACCTTCTAAGCCGCCACCATCAACCCCGCCTGCCAAACCAAAACCACAAAGCCCACATTCCAAGCCGCCAGCATCAATCCCAATCACCAAACCAAAATCAGTGAAG
CCAAAGAATAAAAAGAAACCATCGAAACCAAAAGATAAGAAGAAACCACCAAAGCCAAAAGATAAGAAAAAATCATCAAAATCAAAGTCATCTAAACCCAAACACAGAAAATGA

Retrieve as FASTA