Entry information : CpapPrx41 (evm.model.supercontig_525.1)
Entry ID 8769
Creation 2011-06-28 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2012-01-05 (Qiang LI)
Peroxidase information: CpapPrx41 (evm.model.supercontig_525.1)
Name (synonym) CpapPrx41 (evm.model.supercontig_525.1)
Class Class III peroxidase     [Orthogroup: Prx030]*
Taxonomy Eukaryota Viridiplantae Streptophyta Caricaceae Carica
Organism Carica papaya    [TaxId: 3649 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CpapPrx41
start..stop
S start..stop
PtPrx08 495 3e-179 1..283 49..331
MePrx06 494 8e-179 1..283 48..330
PtrePrx03 492 8e-178 1..283 48..330
CsPrx36 485 4e-175 1..281 49..329
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2581..2670 90 N° 2 2285..2473 189 N° 3 1893..2058 166 N° 4 894..1300 407
complement(join(894..1300,1893..2058,2285..2473,2581..2670))


exon

Literature and cross-references CpapPrx41 (evm.model.supercontig_525.1)
DNA ref. Phytozome 11:   supercontig_525 (2670..894)
Protein sequence: CpapPrx41 (evm.model.supercontig_525.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   283
PWM (Da):   %s   31919.04  
PI (pH):   %s   6.17
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
IKQEVIKLYYKHGNTAVSWVRNLFHDCVVKSCDASLLLETMNGIRSEQESERSFGMRNFKYVETIKDALEKECPLTVSCADVVALSARDGIVMLGGPRIEMKTGRKDSKESYISEVETSIPNHNDSISSVLARFKSIGIDVEGTVALLGAHSVGRVHCVNLVRRLYPTVDPTWDPEYAEYIKGRCPTSDPDPNAVLYARNDRETPMILDNMYYKNILNHKGLLLIDQQLAFDPTTTPFVEKMAADNGYFHDQFVRAIQLLSEINPLTNDQGEVRKNCRFVNSN

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from phytozome (5' end is missing due to the NNNN in DNA sequence).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATCAAACAAGAAGTTATAAAGCTCTACTATAAACATGGAAACACTGCTGTTTCTTGGGTCAGAAATTTATTCCACGATTGTGTTGTTAAGGTACGAATCTTGGGAAGATCCTTAATTATA
TTACATGTAGTACGTACATGTATATATATCAATAAAACTATGCATATTAGATTATGTATGAATATTTTGATGTGCAGTCATGCGATGCATCATTATTGTTGGAGACAATGAATGGGATAA
GATCAGAGCAGGAATCTGAAAGAAGCTTTGGCATGAGAAATTTCAAATATGTTGAAACAATCAAAGATGCCCTAGAAAAGGAATGCCCACTCACCGTCTCTTGTGCAGATGTTGTCGCTC
TCTCTGCTAGAGATGGCATCGTCATG
GTATGTTTTCCTTATCTAATATATGCATATATATATATATATATATATCAACTTTTATTTATAATACAATAAGCACGCACGAAATTTAGTCAAA
TGGGATCTGGATGATACATATATATAAATTATTAACTTTTTTAGTCATGTATAAAGGATCAATGAAATGGGATCTTGTTAACATACATATATATGAGATATAATATATATATATATATAT
ATATATATGCAGTTGGGAGGACCACGTATTGAGATGAAGACAGGAAGGAAAGATAGCAAAGAAAGTTATATATCAGAGGTAGAAACCTCCATTCCAAACCACAATGACTCCATTTCGTCA
GTGCTGGCTAGATTTAAATCCATTGGCATTGATGTTGAAGGAACAGTCGCACTCTTAG
GTATTATATATATATATAACATCACTCTTTTTAAATTTTCATTAATTATTAATTATAAACAA
AATAAAGTGTTTAATTATAAACACTAATTTTTAAGTCATCAAATAGTGATCCTTAAATAATAATAATAATAACTTTTTAAAGTACTAATAATTTAGCACAACATTAATATTATTATAAAC
TTAAAATTAATCATTGTCTCACATGCACTAATATTAATCAAATCACAAAATTGACTAATTTGTATATATATATATATAACCAAATGTATGCATGCCTAAGTTCACTGAATCATTGCCCTG
CTGGACCTATTTGAATTTTGGTTTGTTCTTATCTGCAATTCATCACCTTAGGAAATAAATATTTTCTTACTTCACCAAACAATTATTATCTTATTTTTTATTTTAACGATTAATAAGGTT
AAAAAAATTAATCTAGCTATCATTCTATTAGGTTTGTAATTATTCTTCCACTTAATCCACCAGATTAATTTTGACAACTATAAATTAGAATTACCAATTATATTAATCCAATTCAACAAT
ATTAATTAATTAACTCTTAGTAATATCAAATGAGTTTTGTCCATGTACAGGAGCTCACTCTGTAGGTCGAGTTCATTGTGTGAACTTGGTTCGTAGACTTTACCCAACAGTGGATCCAAC
ATGGGACCCTGAGTACGCAGAGTATATAAAAGGTCGGTGCCCTACATCTGACCCAGATCCAAATGCAGTGTTGTATGCACGAAACGACAGAGAAACACCTATGATTTTGGATAATATGTA
CTACAAGAATATACTGAACCACAAAGGACTTCTTCTTATTGATCAACAGCTGGCTTTTGATCCCACAACAACTCCGTTCGTAGAGAAAATGGCAGCCGATAATGGCTACTTTCACGACCA
GTTTGTCAGGGCAATTCAGTTATTATCTGAGATTAATCCTCTCACTAATGATCAAGGCGAGGTCAGAAAGAATTGTCGATTTGTCAATTCGAACTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATCAAACAAGAAGTTATAAAGCTCTACTATAAACATGGAAACACTGCTGTTTCTTGGGTCAGAAATTTATTCCACGATTGTGTTGTTAAGTCATGCGATGCATCATTATTGTTGGAGACA
ATGAATGGGATAAGATCAGAGCAGGAATCTGAAAGAAGCTTTGGCATGAGAAATTTCAAATATGTTGAAACAATCAAAGATGCCCTAGAAAAGGAATGCCCACTCACCGTCTCTTGTGCA
GATGTTGTCGCTCTCTCTGCTAGAGATGGCATCGTCATG
TTGGGAGGACCACGTATTGAGATGAAGACAGGAAGGAAAGATAGCAAAGAAAGTTATATATCAGAGGTAGAAACCTCCATT
CCAAACCACAATGACTCCATTTCGTCAGTGCTGGCTAGATTTAAATCCATTGGCATTGATGTTGAAGGAACAGTCGCACTCTTAG
GAGCTCACTCTGTAGGTCGAGTTCATTGTGTGAAC
TTGGTTCGTAGACTTTACCCAACAGTGGATCCAACATGGGACCCTGAGTACGCAGAGTATATAAAAGGTCGGTGCCCTACATCTGACCCAGATCCAAATGCAGTGTTGTATGCACGAAAC
GACAGAGAAACACCTATGATTTTGGATAATATGTACTACAAGAATATACTGAACCACAAAGGACTTCTTCTTATTGATCAACAGCTGGCTTTTGATCCCACAACAACTCCGTTCGTAGAG
AAAATGGCAGCCGATAATGGCTACTTTCACGACCAGTTTGTCAGGGCAATTCAGTTATTATCTGAGATTAATCCTCTCACTAATGATCAAGGCGAGGTCAGAAAGAATTGTCGATTTGTC
AATTCGAACTAA

Retrieve as FASTA