Entry information : CpapPrx[P]10 (evm.model.supercontig_14.86)
Entry ID 8791
Creation 2011-06-28 (Qiang Li)
Last sequence changes 2011-12-01 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Qiang Li
Last annotation changes 2012-01-05 (Qiang Li)
Peroxidase information: CpapPrx[P]10 (evm.model.supercontig_14.86)
Name (synonym) CpapPrx[P]10 (evm.model.supercontig_14.86)
Class Class III peroxidase     [Orthogroup: Prx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Caricaceae Carica
Organism Carica papaya    [TaxId: 3649 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CpapPrx[P]10
start..stop
S start..stop
GhPrx27 396 4e-141 1..226 101..326
GaPrx06 395 8e-141 1..226 101..326
RcPrx41 393 5e-140 1..226 95..320
MePrx33 386 4e-137 1..226 94..319
Literature and cross-references CpapPrx[P]10 (evm.model.supercontig_14.86)
DNA ref. Phytozome 12:   supercontig_14 (1003425..1002965)
Protein sequence: CpapPrx[P]10 (evm.model.supercontig_14.86)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   226
PWM (Da):   %s   24848.81  
PI (pH):   %s   9.39
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
LSLPGDAFDV IVRAKTALEL ACPNTVSCAD ILAVATRDLL TMLGGPYYGV VLGRKDGRVS QSRLIRNRLP LPSMPISQLI DLFASRGFSV QEMVALSGAH TVGFSHCKEF SSRIGNDSHY 
NPRFAAGLQK ACAGYPKDPT LSVFNDIMTP NKFDNLYFQN LPKGLGLLES DHGLYGDPRT RELVELYAKD QAKFFQDFAR AMQKLSLYGV KTGRRGEIRR RCDAIN 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from phytozome (only last exon in supercontig_14 due to undetermined sequence, exons 2 to 4 in contig_45132-contig_45132 (114..794)).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CTATCTCTCC CCGGAGATGC CTTCGACGTT ATCGTCCGAG CCAAGACCGC CCTCGAGCTT GCTTGCCCCA ACACTGTTTC CTGCGCCGAC ATCCTCGCCG TTGCCACCCG TGACCTCCTC  ACAATGCTTG GAGGTCCCTA CTACGGTGTC GTTTTGGGTC GTAAGGACGG CCGCGTCTCC CAGTCCCGTC TCATCCGAAA TAGACTCCCC CTTCCTTCGA TGCCCATTTC CCAACTCATC  GACCTCTTCG CTTCCCGCGG GTTCAGTGTC CAGGAGATGG TAGCTCTGAG CGGCGCCCAC ACCGTCGGGT TCTCGCACTG CAAGGAGTTC AGCTCCCGAA TCGGGAACGA TAGCCATTAC  AACCCGAGAT TCGCGGCCGG ATTGCAGAAA GCCTGTGCTG GTTATCCCAA GGACCCGACC CTATCGGTGT TCAACGATAT AATGACACCC AACAAGTTCG ACAATCTGTA TTTCCAGAAC  CTGCCCAAGG GTCTGGGGCT CTTGGAGTCG GATCACGGGC TTTACGGTGA CCCGAGGACG AGAGAACTCG TGGAATTGTA CGCCAAAGAT CAGGCAAAGT TTTTCCAGGA TTTTGCTCGA 
GCGATGCAGA AACTCAGCCT TTATGGAGTG AAGACCGGGA GGAGAGGGGA GATCAGGCGC AGGTGTGACG CCATCAACTA A 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CTATCTCTCC CCGGAGATGC CTTCGACGTT ATCGTCCGAG CCAAGACCGC CCTCGAGCTT GCTTGCCCCA ACACTGTTTC CTGCGCCGAC ATCCTCGCCG TTGCCACCCG TGACCTCCTC  ACAATGCTTG GAGGTCCCTA CTACGGTGTC GTTTTGGGTC GTAAGGACGG CCGCGTCTCC CAGTCCCGTC TCATCCGAAA TAGACTCCCC CTTCCTTCGA TGCCCATTTC CCAACTCATC  GACCTCTTCG CTTCCCGCGG GTTCAGTGTC CAGGAGATGG TAGCTCTGAG CGGCGCCCAC ACCGTCGGGT TCTCGCACTG CAAGGAGTTC AGCTCCCGAA TCGGGAACGA TAGCCATTAC  AACCCGAGAT TCGCGGCCGG ATTGCAGAAA GCCTGTGCTG GTTATCCCAA GGACCCGACC CTATCGGTGT TCAACGATAT AATGACACCC AACAAGTTCG ACAATCTGTA TTTCCAGAAC  CTGCCCAAGG GTCTGGGGCT CTTGGAGTCG GATCACGGGC TTTACGGTGA CCCGAGGACG AGAGAACTCG TGGAATTGTA CGCCAAAGAT CAGGCAAAGT TTTTCCAGGA TTTTGCTCGA 
GCGATGCAGA AACTCAGCCT TTATGGAGTG AAGACCGGGA GGAGAGGGGA GATCAGGCGC AGGTGTGACG CCATCAACTA A 

Retrieve as FASTA