Entry information : CsaPrx21 (Cucsa.072840.1)
Entry ID 8811
Creation 2011-06-29 (Qiang Li)
Last sequence changes 2011-12-07 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-11 (Christophe Dunand)
Peroxidase information: CsaPrx21 (Cucsa.072840.1)
Name (synonym) CsaPrx21 (Cucsa.072840.1)
Class Class III peroxidase    [Orthogroup: Prx009]
Taxonomy Eukaryota Viridiplantae Streptophyta Cucurbitaceae Cucumis
Organism Cucumis sativus    [TaxId: 3659 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsaPrx21
start..stop
S start..stop
MePrx24 513 0 14..328 11..326
ThasPrx28 506 0 9..327 51..371
PtPrx27 497 3e-179 17..328 14..327
PtPrx25 496 5e-179 14..328 11..325
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 393160..393378 219 N° 2 393482..393673 192 N° 3 393817..393979 163 N° 4 394094..394503 410
join(393160..393378,393482..393673,393817..393979,394094..394503)


exon

Literature and cross-references CsaPrx21 (Cucsa.072840.1)
DNA ref. Phytozome 12:   scaffold00765 (393160..394503)
Protein sequence: CsaPrx21 (Cucsa.072840.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (302)
PWM (Da):   %s   35972.39 (33158.8) Transmb domain:   %s   i7-26o
PI (pH):   %s   8.01 (7.47) Peptide Signal:   %s   cut: 27 range:27-328
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRMQRLTFLVLATIVGLLSLIGSTQAQLKLGFYAKSCPHAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDASVLINSTSNNQAERDSAPNQTLRGFDFIDRVKSLLEDECPGVVSCADVLSLIARDTIVATGGPYWEVPTGRRDGVISRSREALNNIPPPFGNLSTLQRLFSNQGLDLKDLVLLSGAHTIGIAHCQSFSNRLYNFTGVGDQDPSLDPRYAANLKANKCRTPTANNKVEMDPGSRNTFDLSYYSLLLKRRGLFESDAALTTDATTLGLVQKLVEGPIEEFFAEFAASMEKMGRIKVKTGTEGEIRRRCGVVN

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGAATGCAGAGGCTTACTTTTTTGGTGTTGGCCACTATAGTTGGTCTTCTAAGCCTGATAGGCTCCACTCAAGCTCAGCTAAAGCTTGGTTTCTATGCCAAAAGCTGCCCACACGCT
GAGAAGATTGTGCTAGATTTCGTTCACCAGCATATCCACAATGCCCCTTCATTGGCAGCAACTTTCATTAGAATGCACTTCCACGATTGCTTTGTCAGG
GTATTGTTTCTTTTCGTTTCC
ATCTTCATGAAAATCCTTAATCCTTACAACTCCTATATGCAACTGACATTTACTTCTCTCTGTTTGATGTGTTGCTGAACAGGGTTGTGATGCATCTGTGCTTATAAACTCCACCTCAAA
CAACCAAGCTGAGAGGGATTCTGCACCAAATCAAACACTCAGAGGCTTTGACTTCATTGATAGAGTCAAAAGCTTACTTGAAGATGAATGCCCTGGAGTGGTCTCTTGCGCAGATGTTCT
TTCCTTGATTGCAAGAGATACCATTGTAGCCACA
GTAAGAATCCACCCAGCCGACCAAATGCCCTTTTAACTTTTCCAGTGTTCGATGCTGTTTGTACTCTCTTTTCTTATCGAAAAATG
AAAAAGACAAGCAACACACTTTCTCTATTTGATGGTTGTATTCATTTCAATATGCAGGGAGGTCCTTACTGGGAAGTTCCAACTGGCCGAAGAGATGGAGTGATCTCAAGATCAAGAGAA
GCCTTAAATAACATTCCTCCTCCATTTGGAAACTTGTCCACGCTCCAAAGACTTTTCTCAAACCAAGGCCTTGATCTAAAAGACTTGGTGTTACTATCTG
GTAAGTTCCATATAATTTAA
AAAGTAACCAAAAAAAAAGAAAAAGTAACCCCATTAACACTAATTCTTCACTCAGTACTTTTCTGAAACACGTTGCATCCAATCATGATTTCAGGCGCTCACACAATCGGCATAGCACAC
TGCCAATCATTCAGCAATCGACTCTACAATTTCACCGGGGTAGGAGACCAAGATCCCTCTCTAGACCCAAGATACGCTGCTAATCTGAAGGCTAACAAATGCCGAACTCCCACCGCCAAC
AACAAAGTGGAAATGGACCCAGGAAGTCGTAACACTTTTGACCTTAGCTACTATTCTCTTCTACTAAAAAGGAGGGGCCTCTTCGAATCCGATGCTGCTCTTACAACAGACGCAACTACA
TTGGGTTTAGTTCAGAAACTGGTAGAAGGACCCATTGAAGAATTCTTCGCTGAATTTGCAGCATCCATGGAGAAAATGGGTCGGATTAAAGTGAAAACTGGAACTGAAGGTGAAATCAGA
AGGAGATGCGGTGTGGTGAATAGT

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGAATGCAGAGGCTTACTTTTTTGGTGTTGGCCACTATAGTTGGTCTTCTAAGCCTGATAGGCTCCACTCAAGCTCAGCTAAAGCTTGGTTTCTATGCCAAAAGCTGCCCACACGCT
GAGAAGATTGTGCTAGATTTCGTTCACCAGCATATCCACAATGCCCCTTCATTGGCAGCAACTTTCATTAGAATGCACTTCCACGATTGCTTTGTCAGG
GGTTGTGATGCATCTGTGCTT
ATAAACTCCACCTCAAACAACCAAGCTGAGAGGGATTCTGCACCAAATCAAACACTCAGAGGCTTTGACTTCATTGATAGAGTCAAAAGCTTACTTGAAGATGAATGCCCTGGAGTGGTC
TCTTGCGCAGATGTTCTTTCCTTGATTGCAAGAGATACCATTGTAGCCACA
GGAGGTCCTTACTGGGAAGTTCCAACTGGCCGAAGAGATGGAGTGATCTCAAGATCAAGAGAAGCCTTA
AATAACATTCCTCCTCCATTTGGAAACTTGTCCACGCTCCAAAGACTTTTCTCAAACCAAGGCCTTGATCTAAAAGACTTGGTGTTACTATCTG
GCGCTCACACAATCGGCATAGCACAC
TGCCAATCATTCAGCAATCGACTCTACAATTTCACCGGGGTAGGAGACCAAGATCCCTCTCTAGACCCAAGATACGCTGCTAATCTGAAGGCTAACAAATGCCGAACTCCCACCGCCAAC
AACAAAGTGGAAATGGACCCAGGAAGTCGTAACACTTTTGACCTTAGCTACTATTCTCTTCTACTAAAAAGGAGGGGCCTCTTCGAATCCGATGCTGCTCTTACAACAGACGCAACTACA
TTGGGTTTAGTTCAGAAACTGGTAGAAGGACCCATTGAAGAATTCTTCGCTGAATTTGCAGCATCCATGGAGAAAATGGGTCGGATTAAAGTGAAAACTGGAACTGAAGGTGAAATCAGA
AGGAGATGCGGTGTGGTGAATAGT

Retrieve as FASTA