Entry information : CsaPrx24 (Cucsa.087760.1)
Entry ID 8814
Creation 2011-06-29 (Qiang Li)
Last sequence changes 2016-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-01-11 (Achraf Jemmat)
Peroxidase information: CsaPrx24 (Cucsa.087760.1)
Name (synonym) CsaPrx24 (Cucsa.087760.1)
Class Class III peroxidase    [Orthogroup: Prx029]
Taxonomy Eukaryota Viridiplantae Streptophyta Cucurbitaceae Cucumis
Organism Cucumis sativus    [TaxId: 3659 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsaPrx24
start..stop
S start..stop
VvPrx65 486 4e-175 11..326 7..322
HaPrx08 479 5e-172 1..326 1..326
MePrx64 476 5e-171 4..326 1..323
CclPrx43 469 2e-168 6..326 4..324
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 310947..311162 216 N° 2 311995..312186 192 N° 3 312825..313397 573  
join(310947..311162,311995..312186,312825..313397)


exon

Literature and cross-references CsaPrx24 (Cucsa.087760.1)
DNA ref. Phytozome 11:   scaffold00888 (310947..313394)
Protein sequence: CsaPrx24 (Cucsa.087760.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (301)
PWM (Da):   %s   34855.45 (32190.0) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.68 (7.31) Peptide Signal:   %s   cut: 26 range:26-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAGMAMRVAVLSLALLCMLIGVVHAQLSFNFYNSSCPNVEQIVRQAVSLKINQTFVTIPATLRLFFHDCFVQGCDASVMIASASGDAEKDSEDNLSLAGDGFDTVIKAKQAVEAQCPGKVSCADILAIAARDVVVLAGGQNFAVELGRRDGLISKASLVAGNLPGPNFNLSQLNTMFAKNNLTQTNMIALSGAHTVGFSHCSRFANRLYNFSATSKVDPSLDPKYAKQLMGACPQDVDPRIAVNMDPVTPRKMDNVYYQNLVNHKGLFTSDQVLYTDPLSQATVSGFANDRSGFNKAFGEAMVQLGRVGVKTGAAGEIRKDCTAFN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 1 and 2).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGGCATGGCAATGCGAGTGGCGGTGTTGTCTTTGGCTCTGCTTTGCATGCTCATTGGCGTTGTCCATGCGCAGCTCTCCTTCAACTTCTACAATTCCTCCTGCCCAAATGTCGAA
CAAATCGTTCGCCAAGCCGTAAGCTTAAAGATTAACCAAACATTCGTTACCATTCCAGCAACTCTTAGGCTTTTCTTCCATGACTGCTTTGTTCAG
GTAACTTATAGGATTTGCTTTCTT
TATTCAAACAATTATGAGGTTAATTTATAAACTTAAACAGGTTTTGCGTGTTTCCTTTCATCCGCTTATATACATTTATATGCGAGTTTGGTTTGTTTATACTTAACTCAAATTACACTA
TTAAATATTATATGTTATGAACTAATTTCACAAATAAATACATGTACTATATTTTTTTAGAATTATTTTGAAATTATTAATTTTTTAGCTACCTCATGATTTCATTTTTTTGTATTAATT
TTTTTTTGTGGACATTCAAATTTTAGAAAATACAAATATCTTGAAATGTAAATACATAATCATAGAAAAAATAATTGATTTCCAAGAACAAAATATAAATAAGATCAATAATTTTTCCGA
GACAATATAATCTTCAACTAGACAAAACGATGTGCAGTTCGATTATTTTCTTCATATTTACCTTCATTTCACGAACCGAACAATCATATTATTCATTGGCGTTCTCATAATTTCTTTCAC
ACATGTTAAGATCAAATAAATTTGGCTGAGAGAGAAACATTTGCAAATTCCTATATTTAAATGTATATGAATACATATTGAAAAAATATTCAAAGTATTTAAAAATAAAAAGAATCACCG
AGAAAAAATATATAGTAAAAATTAATAGAAAAAATAGAATAAAAATAGATATTCGGGAGGAATTAGTAGTAAATTAAAAATTATTCTAAAATTTAGTTGCATTTGTTAATAGGTTCCTAA
ACCCTAGAATGGTAGTAATAAAGTAAATGTGTAGTAGATTAAAAATCTCATATTGGGTGGGTAATTGTGGGTTGTTGTGAAGTTGTAGGGATGTGATGCTTCGGTTATGATAGCGTCCGC
AAGTGGTGATGCTGAAAAAGACTCAGAGGACAACTTGTCGTTGGCAGGAGATGGGTTTGATACTGTGATTAAGGCGAAGCAGGCTGTGGAAGCTCAATGTCCTGGAAAAGTATCGTGTGC
AGATATTTTGGCCATTGCTGCAAGGGATGTCGTGGTTTTG
GTTAGCTTTTCTAAACTCAACTATTTACACACTAAATTATTCAGAGTCTACCATAAGAATGATAGTTTGATTCCAATGGC
ATGTGTTATATATGAGTGATTTCAAAGGAGATTGTTTAGGACAAAGAAGCTTAGGTGTGAACTCTCAAATTTATTTTTTGTCTAAGGGACCAACAAAAATAAAGAATTAATAAGGTATGA
AAGTGATGTTTTTTTTTTGCCTACTAGCACTTGCATGCACCCGATGACCAAGAAATCCTTACTTGAAATCCCTCCACCTACGAACCTATGCGTCATACCATCCCAAATCTTTGTGTTAAA
CACCTTAAAAATGCTTAAAAGATATCACTCTAAAAAAATTAATATTGTGAAAGTTTAATTCCTCTTTTTTACGTATTTTAGAAAAATTTATAAACATTAAATTGATAAATAAGCATATAA
GTTGCTATAAAGACATAAATAACAACGGATAGCCACGAATTTAGTTGGGCTCTGGATGATTTTTGGCAACTTCAGTTTAGATTGAAACGTTATACTCATGTGTAATTGAGAGTGATTAAG
AAATGTGTATTTTAACCATTTCCAAATGACTTTTAAAAATCTACTAATTTCTTGTGTAATTCAACTGATATTATATAGGCGGGAGGACAAAATTTTGCTGTGGAATTAGGACGACGAGAT
GGGCTAATCTCAAAAGCCTCATTGGTAGCTGGAAACTTACCGGGACCAAACTTCAACCTAAGCCAACTAAACACAATGTTTGCCAAAAATAACCTAACCCAAACCAACATGATCGCATTA
TCAGGAGCCCACACGGTTGGGTTCTCACACTGCAGCCGTTTCGCGAACCGTCTCTACAACTTCTCAGCCACTTCCAAAGTAGACCCTTCTCTGGATCCGAAGTACGCCAAGCAGCTCATG
GGCGCATGCCCACAAGACGTGGACCCTAGAATCGCTGTGAACATGGACCCAGTAACCCCAAGGAAAATGGACAACGTGTATTACCAAAATCTTGTGAACCATAAGGGGCTTTTCACGTCG
GACCAAGTGCTGTATACGGATCCATTGTCGCAAGCCACCGTGAGTGGGTTTGCGAATGATCGCAGTGGGTTCAATAAAGCGTTTGGAGAGGCTATGGTTCAGCTTGGGAGAGTGGGGGTT
AAGACGGGGGCTGCGGGTGAGATTAGAAAAGATTGTACTGCCTTTAATTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGGCATGGCAATGCGAGTGGCGGTGTTGTCTTTGGCTCTGCTTTGCATGCTCATTGGCGTTGTCCATGCGCAGCTCTCCTTCAACTTCTACAATTCCTCCTGCCCAAATGTCGAA
CAAATCGTTCGCCAAGCCGTAAGCTTAAAGATTAACCAAACATTCGTTACCATTCCAGCAACTCTTAGGCTTTTCTTCCATGACTGCTTTGTTCAG
GGATGTGATGCTTCGGTTATGATA
GCGTCCGCAAGTGGTGATGCTGAAAAAGACTCAGAGGACAACTTGTCGTTGGCAGGAGATGGGTTTGATACTGTGATTAAGGCGAAGCAGGCTGTGGAAGCTCAATGTCCTGGAAAAGTA
TCGTGTGCAGATATTTTGGCCATTGCTGCAAGGGATGTCGTGGTTTTG
GCGGGAGGACAAAATTTTGCTGTGGAATTAGGACGACGAGATGGGCTAATCTCAAAAGCCTCATTGGTAGCT
GGAAACTTACCGGGACCAAACTTCAACCTAAGCCAACTAAACACAATGTTTGCCAAAAATAACCTAACCCAAACCAACATGATCGCATTATCAGGAGCCCACACGGTTGGGTTCTCACAC
TGCAGCCGTTTCGCGAACCGTCTCTACAACTTCTCAGCCACTTCCAAAGTAGACCCTTCTCTGGATCCGAAGTACGCCAAGCAGCTCATGGGCGCATGCCCACAAGACGTGGACCCTAGA
ATCGCTGTGAACATGGACCCAGTAACCCCAAGGAAAATGGACAACGTGTATTACCAAAATCTTGTGAACCATAAGGGGCTTTTCACGTCGGACCAAGTGCTGTATACGGATCCATTGTCG
CAAGCCACCGTGAGTGGGTTTGCGAATGATCGCAGTGGGTTCAATAAAGCGTTTGGAGAGGCTATGGTTCAGCTTGGGAGAGTGGGGGTTAAGACGGGGGCTGCGGGTGAGATTAGAAAA
GATTGTACTGCCTTTAATTAA

Retrieve as FASTA