Entry information : CsPrx[P]64 (orange1.1g040977m)
Entry ID 8875
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2017-12-14 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2017-12-14 (Qiang Li)
Peroxidase information: CsPrx[P]64 (orange1.1g040977m)
Name (synonym) CsPrx[P]64 (orange1.1g040977m)
Class Class III peroxidase     [Orthogroup: Prx041]*
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus sinensis    [TaxId: 2711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsPrx[P]64
start..stop
S start..stop
CclPrx119 537 0 1..319 1..337
PpePrx23 434 3e-154 4..319 1..332
CsaPrx88 418 4e-148 1..319 1..331
PtPrx83 404 2e-142 28..319 33..337
Literature and cross-references CsPrx[P]64 (orange1.1g040977m)
DNA ref. GenBank:   NC_023052.1 (20498100..20499742) Phytozome 12:   scaffold01063 (16526..16040)
Cluster/Prediction ref. Genebank:   102623466
Protein sequence: CsPrx[P]64 (orange1.1g040977m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   322 (299)
PWM (Da):   %s   35833.58 (33155.1)  
PI (pH):   %s   6.94 (6.58) Peptide Signal:   %s   cut: 24 range:24-322
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MENIRILLLI VLMFMLHGRK ISGEGDGVLV QDYYKETCPL AEEIIRRIVE NAVVKDPRMA ASLLRLHFHD CFLMVTFDPI xSLLSVxGFE VIDEIKFILE DACPHTISCA DILTIAARDA  VALRGGLTWK VLLGRTDSLK ASFDGAKKYI PFPNSSLETL IANFEHQGLD IRDLVALSGS HTIGEARCLS FRQSIYDVNI KEEHYDKYKI xTTFRRIVRS ICPESGRDNE VAPLDYTTPA 
RFGNHxYLNI LRGRGLLPSD NLLVTQDHRQ GEIIQLVWAH ASDQQFFCDS FVNSIVKVGK INVLTGHHGQ IRNDCRFVNK EN 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic (chromo 7). Incorrect prediction from phytozome (3' end is missing due to NNNNN in DNA). Some short seqs in frame are missing which have been completed manually.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGAATA TAAGGATACT ATTGTTGATT GTATTGATGT TCATGTTGCA TGGAAGAAAG ATTTCGGGTG AAGGTGATGG AGTTCTTGTT CAGGATTACT ACAAAGAGAC ATGCCCCTTA  GCAGAAGAGA TTATCAGACG TATTGTCGAG AATGCCGTGG TTAAAGATCC TCGCATGGCA GCATCACTCC TACGCTTGCA CTTTCATGAT TGCTTTCTCA TGGTTACATT TGATCCCATC  ATCTCTCTTA TCTGTGTGAG GATTCGAAGT GATTGATGAG ATCAAGTTCA TTTTAGAAGA TGCATGTCCC CACACAATTT CATGTGCTCT GATATTCTAA CCATTGCCGC TCGTGATGCT  GTTGCTTTGG TATGTAATGT AACTCTCTCC ACATTTCGTT TTGTAGATAT TCGTGCATAT TCAACATTAA ATCTGAAAGC GTACCTAACC TTTTTGATCC CCGAACGCAT CTCCAAACGC  AGAAGCAGGT TATGTCACTG TCTCTATTCA GCGGATTACA ATAAGTTACG TTGCTTTGGC ATGAGAATTT AAGGAAAAAT CCTCATGCCA ATGTATGTTT ATGCCAATGT TTATCGATTC  GATCCGAGAT CTATTATTGT ATGTTTAGCC AATGTTTGTT GGGATATTAC TATCGATTCG ATAGCTATTA TTGTATTTTC TAATACGTTA TATATACTTC CATGTCTTAT ATAAACTTCC  ATGTCTCTCA CATACAAAAT TTAGGTACAA TATGTGTATT TATATAAAAG CTAATGTAAG TGATAGAAGT TAAAATAAAA GACTTCATAA CTCTTAGAGT TCAATTAGAC TTGCAATAAT  GATATAGATT GTTGTTTATG TTCGGCCGGG CCAACTCCAA TGCTTCTCTT ACAAGTTTAG TGATATACTT ACAAGCCTCT GACTTTTATA TTATCAGAGA GGAGGACTGA CATGGAAGGT  CTTGCTTGGA AGGACAGATT CACTGAAAGC GAGCTTTGAC GGAGCCAAAA AGTACATTCC TTTTCCCAAT TCCTCTCTGG AGACTCTTAT TGCAAATTTT GAACATCAAG GTCTTGACAT  TAGAGACTTG GTTGCTTTAT CAGGTTCAAT CAAAATAATG TGAATTAACA AGCCACTATC TTACATCCCA AGTTTCAAAT TTTGTGGTAA AATGTTGAAA TTGACTTGAA AAAAATAAAC  TGTCAATAGG TAGCCACACA ATTGGTGAGG CAAGATGTCT GAGCTTCAGG CAAAGTATCT ATGACGTTAA CATTAAAGAA GAACATTATG ATAAATACAA AATATAAACA ACATTTCGGA  GAATCGTACG GTCCATATGC CCTGAATCAG GAAGAGATAA CGAAGTGGCG CCGCTTGATT ATACGACTCC TGCAAGGTTT GGCAATCATT AGTACCTCAA CATTCTTCGA GGAAGAGGTC  TGCTGCCATC AGATAATCTA CTAGTGACTC AAGACCATCG TCAAGGAGAA ATAATTCAGC TAGTGTGGGC ACATGCCTCT GATCAACAAT TCTTCTGTGA TTCATTTGTA AATTCTATTG 
TCAAGGTGGG AAAGATAAAT GTACTCACTG GCCACCACGG GCAAATCAGG AACGACTGTA GGTTTGTCAA TAAAGAGAAC TAG 

Retrieve as FASTA