Entry information : GmPrx188 (Glyma09g41450.1)
Entry ID 8977
Creation 2011-07-04 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-26 (Christophe Dunand)
Peroxidase information: GmPrx188 (Glyma09g41450.1)
Name (synonym) GmPrx188 (Glyma09g41450.1)
Class Class III peroxidase    [Orthogroup: Prx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx188
start..stop
S start..stop
GmPrx52 623 0 1..316 1..316
LjPrx10 537 0 1..316 1..316
AhPrx04 519 0 1..316 1..316
GrPrx38 508 0 4..316 8..323
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 46123119..46123325 207 N° 2 46121759..46121950 192 N° 3 46121409..46121574 166 N° 4 46120487..46120872 386
complement(join(46120487..46120872,46121409..46121574,46121759..46121950,4612311 9..46123325))


exon

Literature and cross-references GmPrx188 (Glyma09g41450.1)
DNA ref. Phytozome 11:   Gm09 (46123325..46120487)
Protein sequence: GmPrx188 (Glyma09g41450.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   317 (294)
PWM (Da):   %s   33375.51 (30773.0)  
PI (pH):   %s   7.93 (7.31) Peptide Signal:   %s   cut: 23 range:23-316
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MILPNIKVRFFLLFCLIGIVSAQLSSTFYAKTCPNALSTIKSEVVSAVNNERRMGASLLRLHFHDCFVQGCDASVLLDDTSSFTGEKTAGPNAGSIRGFDVIDTIKSKVESLCPGVVSCADILAVAARDSVVALGGTTWTVQLGRRDSTTASLSSANSDLPGPTSSLSALISSFSNKGFSSKELVALSGSHTIGQAQCSSFRTRIYNDTNIDSSFAKSLQGNCPSTGGDSNLAPLDTTSPNTFDNAYFKNLQSKKGLLHSDQELFNGGSTDSQVNSYSSNPASFQTDFANAMIKMGNLSPLTGSSGQIRTNCRKTN

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) . Incorrect prediction from phytozome (Extra short sequence at 5' end).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATCCTTCCAAACATCAAAGTTCGTTTTTTCTTACTCTTTTGCCTTATTGGGATAGTGTCAGCTCAGTTATCCTCTACCTTTTATGCCAAAACGTGTCCTAATGCACTTTCAACCATT
AAATCAGAAGTAGTGTCTGCTGTGAACAACGAGCGTCGCATGGGAGCCTCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTTCAA
GCAAGTCAACTTTCACTATGCCCCTTTTTTTAT
TATTATTTATTTACTCTTTCGGCACCATAAGTTTATGCTTGAAGGCTTAACCTAATATATATGTATATGGGTTGCATTTACTATGCATGCACGTGTTCACACACACACAAAATTAATCAT
TAGTTACGGAAAAATTATATATTTTATCGTAATTACTAAAGTCATTTTTTTTTACTTATATATAACGTCATAGAGCGACGATACGACTTCAATTCGCATATATTGAAGAAGAAAAAAAAT
CACACATGTTAACAACTTAAGAGATAATAATGTGATTAATTGACCATCTCTTGAATTTTGTTCCTTCTTCAGTTCATTTGTGCTTTAGTGCGATAAACTATTTATTTGTCTATGCAAGTC
AATAATCTAACACTTTATCACTGATTATCACGGTAAATTTGACTGATTATTACGATTTGGATTTGGTTTCATAAAGTATAATTTTAATGTTAGATTTTAGCATGGTAAGATATATAATTA
TTTAGTTATATGAGTCAATATGTTTATTATTCTAAATACTATTCGGTTTTACTAAAAAGAGACTTTAGTCGTTCGAATAGGGCAGGAGCCTTAAAGAAATCTACTCTTGAAGTCCCACGA
GCTGGGGGAATTGGGGAAAGTAATTAGAAACGTAAGGAAAATAATGATATGAGATTTTAATTTTCTTTTTTCAGAAACAAAAACTTAGATATAATATAGCGAGTATTATTAGTTTGTTTT
TTTTAATAAAAAAAATGAAATTTTTATTTTCTAGTCGTTAATTTTATCTCAATAATCAATCGATATATTATATTAAGAATTAAGAAATTTGTGAAATTATAAAAAGGTTGGATTTTCAAA
ATAAGAAAATCCACTTGCATAATAATATACAAATTTAATTTCACATCAAATTAAAAATAATGGCTAAAAGTGGACTTTTCTGGCAACAAGCATTTGTTTTCAAATTATCATATGCAACAA
AGTGATGTTTAGGCCAAGTCCACATCAACAGAAAAACAAAACTTGACAATATATAGTTCATTCATAATATTTTTTGGCAAAATAAAAATGACAACTAATTAAATTGAATTCGAAATTAAT
AATTCTCATTTTGTTCGTACCTAATTAATGCTTTTGTTTTTATTTTCCATGCCAGGGTTGTGATGCATCAGTACTATTGGATGATACATCGAGTTTCACAGGTGAGAAGACGGCAGGTCC
CAACGCTGGTTCGATTAGAGGCTTTGATGTAATAGACACCATAAAATCTAAAGTGGAAAGCTTATGCCCTGGTGTTGTTTCTTGTGCTGATATCCTTGCTGTAGCAGCAAGAGACTCGGT
CGTTGCT
GTAAGTATATGTATTATTGTCAAGCCAAATATATTATTAATAGAGCAATATAAACATATATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTCTGTCTGAATTTTCAGCTTGGTGGAACTACTTGGACTGTACAATTGGGTAGAAGAGACTCAACCA
CTGCAAGTTTAAGTTCTGCTAACTCAGACTTGCCTGGTCCCACTTCAAGTTTAAGTGCCCTTATCAGTTCTTTCTCCAACAAAGGTTTTTCATCTAAGGAACTGGTTGCTCTTTCAG
GTA
AGCTAGCTAGATATGCATAACTGCAGCATAGTTAGGAATGCTATTTTAAAACATTTTTTTTATTACTTGAAATTTATGCAAGACCTATTAAATTAAGAATGGAACTTGCCCCTATGAGTT
TTACATCATTAACAATAAAAAAATATCTTGAAACAAGTTTATAGCTAGCTGGCAAATATTATTTTTTCTTTCGAACATTGTATATTTTCTTTGAAGAATATATACTAGCTAATCAAATAC
TAATATTTTCTTTCAATATAATTTTTTTATTAGTTAAAATTCATGTATGAGAGTCATATTATATGAAATCATTCAAACGAGGAATAAATCTCATGTATTAGTAAGACTCGTGTGAAATTC
ACACAGTAAGAAAATGTGTTCCAAAGAATTTGTGTGTTGGTAACATTTCTTACTTCTCCTTTTAAATAAGGATGGTCAATATAAATATACGATCACATACATGTCTCTGATCAAATGTTA
TATTTAGCTTTACCATGTACTTTGAACTTTTTTCTAAAACCTATTTCCTTCAGGATCGCACACAATTGGACAAGCTCAATGTTCATCTTTCAGAACAAGGATTTACAACGACACCAACAT
AGATTCCTCTTTTGCAAAATCATTGCAAGGAAATTGCCCTAGCACAGGTGGGGACAGCAATTTGGCCCCTCTTGACACCACAAGCCCAAACACCTTTGACAATGCTTACTTCAAGAACTT
GCAGAGCAAAAAGGGTCTCTTGCACTCAGATCAAGAGCTCTTCAATGGAGGATCCACGGACTCTCAAGTAAATTCCTACAGCAGTAATCCTGCAAGTTTCCAAACTGACTTTGCCAATGC
AATGATTAAAATGGGGAACCTTAGTCCTCTCACTGGGTCTAGTGGCCAGATTAGGACCAATTGTAGGAAGACCAACTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATCCTTCCAAACATCAAAGTTCGTTTTTTCTTACTCTTTTGCCTTATTGGGATAGTGTCAGCTCAGTTATCCTCTACCTTTTATGCCAAAACGTGTCCTAATGCACTTTCAACCATT
AAATCAGAAGTAGTGTCTGCTGTGAACAACGAGCGTCGCATGGGAGCCTCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTTCAA
GGTTGTGATGCATCAGTACTATTGGATGATACA
TCGAGTTTCACAGGTGAGAAGACGGCAGGTCCCAACGCTGGTTCGATTAGAGGCTTTGATGTAATAGACACCATAAAATCTAAAGTGGAAAGCTTATGCCCTGGTGTTGTTTCTTGTGCT
GATATCCTTGCTGTAGCAGCAAGAGACTCGGTCGTTGCT
CTTGGTGGAACTACTTGGACTGTACAATTGGGTAGAAGAGACTCAACCACTGCAAGTTTAAGTTCTGCTAACTCAGACTTG
CCTGGTCCCACTTCAAGTTTAAGTGCCCTTATCAGTTCTTTCTCCAACAAAGGTTTTTCATCTAAGGAACTGGTTGCTCTTTCAG
GATCGCACACAATTGGACAAGCTCAATGTTCATCT
TTCAGAACAAGGATTTACAACGACACCAACATAGATTCCTCTTTTGCAAAATCATTGCAAGGAAATTGCCCTAGCACAGGTGGGGACAGCAATTTGGCCCCTCTTGACACCACAAGCCCA
AACACCTTTGACAATGCTTACTTCAAGAACTTGCAGAGCAAAAAGGGTCTCTTGCACTCAGATCAAGAGCTCTTCAATGGAGGATCCACGGACTCTCAAGTAAATTCCTACAGCAGTAAT
CCTGCAAGTTTCCAAACTGACTTTGCCAATGCAATGATTAAAATGGGGAACCTTAGTCCTCTCACTGGGTCTAGTGGCCAGATTAGGACCAATTGTAGGAAGACCAACTAA

Retrieve as FASTA