Entry information : GmPrx270 (Glyma15g41280.1)
Entry ID 9007
Creation 2011-07-04 (Qiang Li)
Last sequence changes 2011-10-12 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-12-13 (Qiang Li)
Peroxidase information: GmPrx270 (Glyma15g41280.1)
Name (synonym) GmPrx270 (Glyma15g41280.1)
Class Class III peroxidase    [Orthogroup: Prx022]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx270
start..stop
S start..stop
GmPrx168 685 0 1..384 1..383
MtPrx82 579 0 5..384 7..389
PpePrx50 472 3e-168 61..380 8..343
VvPrx90 467 1e-165 13..384 13..375
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 48408917..48409243 327 N° 2 48408211..48408408 198 N° 3 48407296..48407461 166 N° 4 48406385..48406848 464
complement(join(48406385..48406848,48407296..48407461,48408211..48408408,4840891 7..48409243))


exon

Literature and cross-references GmPrx270 (Glyma15g41280.1)
DNA ref. Phytozome 12:   Gm15 (48409243..48406385)
Protein sequence: GmPrx270 (Glyma15g41280.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   384 (364)
PWM (Da):   %s   42522.1 (40315.8)  
PI (pH):   %s   5.09 (4.96) Peptide Signal:   %s   cut: 21 range:21-384
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRSCINLWIVAALVIPVLLTLRSPRGETQTQTQTTSSFSDSSTFSVKLANSFPFNQRIRDGSNLEYDFYMDTCPQAEGVVRSALTRIYFDHRDVAPALLRLFFHDCFIEGCDASLLLDENNGDRNLSVEKQAVPNQTLRGFDKIDLIKEEVEQACPGVVSCADILALAARDSIVLAGGPFYPVLTGRRDSHQSFFEEATDQIPRPDDNVTRTLNLFNLRGFNARETVSLLGGHNIGKIGCDFIQQRLYNFQGTGQPDPSIPLDFLRQMRLNCPDSKNSSTSVDEFTISKMGMSYMQALSSSVSSGASFDTHYYQSLLRGRGLLFADQQLMAEEKTARLVSAYASDDGSTFRMDFARVMLKMSNLDVLTGLQGQVRVNCSLPVSS

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from phytozome (5' end is missing, short PS at 3' end is missing). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGAAGCTGCATCAACCTCTGGATCGTGGCGGCACTCGTCATCCCCGTGCTCCTCACTCTCAGAAGCCCTCGAGGCGAAACCCAAACCCAAACCCAAACCACTTCTTCTTTCTCCGAT
TCTTCTACCTTCTCCGTGAAGCTTGCGAACTCATTTCCATTCAACCAAAGGATCCGAGATGGGTCGAATCTCGAATACGACTTCTACATGGATACGTGTCCCCAAGCGGAGGGTGTTGTT
CGTTCGGCGCTCACTCGCATCTACTTCGACCACAGGGACGTTGCACCTGCTCTTCTTCGTCTCTTCTTCCACGATTGCTTCATCGAG
GTCCTTCTTTTTTCTTTTGTTGGGTTGCTTGTT
TTTTGATAAAATTTTGTGTTTTGTGTTGAAACAGAAAATGGGGTGTTTTTTGTTTTTCCGTTTCTTGGTCTCAAGACCGTGAATTTGGAGTCTTTGTTGTGTTTATTCAAATGGGTGTTT
CTTGATTACTTGGGTTTTTCTTTTGGTTTTTTTAGCTTTTCTTGATTCGTTATTCGTCTCTGCTTTTTGTACTTGGAATATGAATCATGAATATCCTAAATTTCGATCATGATCTTGTGC
TATTGTATAGATCGTTGATTTTCACTTTTTCTTTATAGAGAATTTTGATTTGTGTAAAAACCCTTATACTGTCAATTAGTTAGAAAATAATTTAGATAAGTAATTATTAAGAAGGTTAAT
AATCGTACCATACATGTTAATTTTTGATTGGATGACATTTTGATTAAACTGTTTTCTATGCATGTAAACGATCTCTTATTGACTTTATGTTGCATTTGGGGTGTTGATGAATCAGGGGTG
TGATGCTTCGTTGCTGTTGGATGAGAACAATGGTGATAGAAACCTTTCCGTGGAGAAGCAGGCCGTGCCGAATCAGACATTGAGAGGTTTTGACAAAATTGACTTGATCAAGGAAGAGGT
GGAGCAAGCATGTCCCGGGGTTGTGTCTTGTGCTGACATACTTGCTCTTGCAGCAAGAGATTCCATTGTTTTG
GTACATATTTCTTTGTTTCCAATTAACTTGGGTCTATACCGTATCTT
GAGTTTCAGTTTATGTTGATAGTTTAGGATTTGTTATTCTGATTGTAGTATGATAGCAGATAGAGTTTTTGGATGTTAAATTGAAGATCTGAATTCTGATGCATTTTGACTTTAATTGCA
AGTTTGGAACACTTGTAATGCATTGCTTGGTCCTGCTTCTCTATCCTGAAACTTATTAGCCATCAAAATAATATACCAAAATGTAAAACAATAGTGATGTTTTCATAATATTTCTGGAAT
AGTTTATACTTAATTACTTTTGTTTTTCTTTTCTGAAATACCATCTTTTACTAGCCAGAGAGTGATGGTAAGTTGTTCCTTTTCATGATATCTTTCTCACCCGTTTGTTGTATTAGTAAA
GCCAGTTATAAACAAGTTTACTAAATTGTTTGAATTCAACTTTGTTTATATTCTCTTTCCTACAACTGCTTGTTGGTTTGTTGCAAGTTTGTCTTGACTTGTTTGCTTTCTCTCTCTTAA
TGTCACTTTTGTGCTTGTTCAATCATGTGTCTAGATAGATATTATCCATGTCCTGGATAAGATAAGCAAGTGCATAATTTTTCCTTGAATTCAGGCATATTGATATTATGATTTGGGGCA
GCCAAGTCTTCAAGAATATTCACTTTTGCTGTATGTATATCACACTTCATAGAAGTTCAGCATCATTGTACTTATGATATTTTTTGTGGATCTCCATTGTAGGCTGGTGGACCTTTCTAT
CCAGTTTTAACAGGCAGAAGGGATAGCCATCAATCATTTTTCGAGGAAGCAACTGATCAGATTCCCAGACCTGATGATAACGTTACACGCACACTTAATCTCTTCAATCTCAGAGGATTT
AATGCAAGAGAAACAGTCAGCCTTCTTG
GTACTCACTCAATACATTTCTTGTATCAGTCTAAATGTATTTTTTGTCCCTTTGTTTTTCATCTAGTTCCCCATTCTTAATAAGTTGTAATC
TAGTCCTCATCATTTTTTTGTTACTTCCTTTATATAGTCTCACAGTCTCACTATTATTTCTTTTGTTTATTTTGTCCACTAAGCGTTGGTTTTGCTTGCATTTTGGTCACTCCAAATATT
ATTAGGAGACCAAATGAAAATTTATTATCAGTAGGATAAAAAAGTAAGCAAAGCCTACAATTAATGTCATGTGATCCATAAAGTCTTTTGATCATTAACCGGCCAGATTGCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTGGTTTTCAATGTCATCATCCATGAATAGAATCTGACTAATGGTGTGAAGGAGGA
CACAACATTGGCAAAATCGGTTGTGACTTCATTCAGCAAAGGCTGTACAACTTTCAAGGCACAGGACAGCCAGACCCCAGCATCCCCCTTGATTTCCTTCGTCAGATGAGGCTAAACTGC
CCAGATAGCAAGAACAGCAGCACAAGTGTAGACGAGTTTACGATCTCCAAAATGGGGATGTCATACATGCAAGCACTCTCATCTTCAGTTTCATCAGGAGCATCATTTGACACTCACTAC
TACCAGAGCCTGCTAAGAGGAAGAGGGCTTCTTTTCGCCGATCAGCAGCTGATGGCCGAGGAGAAAACCGCTAGATTGGTCTCTGCTTATGCTTCAGATGATGGATCAACCTTTCGCATG
GACTTTGCCAGGGTCATGTTGAAAATGTCTAACCTTGATGTTCTCACTGGACTTCAAGGCCAGGTTCGAGTCAATTGCTCACTACCTGTGTCTTCTTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGAAGCTGCATCAACCTCTGGATCGTGGCGGCACTCGTCATCCCCGTGCTCCTCACTCTCAGAAGCCCTCGAGGCGAAACCCAAACCCAAACCCAAACCACTTCTTCTTTCTCCGAT
TCTTCTACCTTCTCCGTGAAGCTTGCGAACTCATTTCCATTCAACCAAAGGATCCGAGATGGGTCGAATCTCGAATACGACTTCTACATGGATACGTGTCCCCAAGCGGAGGGTGTTGTT
CGTTCGGCGCTCACTCGCATCTACTTCGACCACAGGGACGTTGCACCTGCTCTTCTTCGTCTCTTCTTCCACGATTGCTTCATCGAG
GGGTGTGATGCTTCGTTGCTGTTGGATGAGAAC
AATGGTGATAGAAACCTTTCCGTGGAGAAGCAGGCCGTGCCGAATCAGACATTGAGAGGTTTTGACAAAATTGACTTGATCAAGGAAGAGGTGGAGCAAGCATGTCCCGGGGTTGTGTCT
TGTGCTGACATACTTGCTCTTGCAGCAAGAGATTCCATTGTTTTG
GCTGGTGGACCTTTCTATCCAGTTTTAACAGGCAGAAGGGATAGCCATCAATCATTTTTCGAGGAAGCAACTGAT
CAGATTCCCAGACCTGATGATAACGTTACACGCACACTTAATCTCTTCAATCTCAGAGGATTTAATGCAAGAGAAACAGTCAGCCTTCTTG
GAGGACACAACATTGGCAAAATCGGTTGT
GACTTCATTCAGCAAAGGCTGTACAACTTTCAAGGCACAGGACAGCCAGACCCCAGCATCCCCCTTGATTTCCTTCGTCAGATGAGGCTAAACTGCCCAGATAGCAAGAACAGCAGCACA
AGTGTAGACGAGTTTACGATCTCCAAAATGGGGATGTCATACATGCAAGCACTCTCATCTTCAGTTTCATCAGGAGCATCATTTGACACTCACTACTACCAGAGCCTGCTAAGAGGAAGA
GGGCTTCTTTTCGCCGATCAGCAGCTGATGGCCGAGGAGAAAACCGCTAGATTGGTCTCTGCTTATGCTTCAGATGATGGATCAACCTTTCGCATGGACTTTGCCAGGGTCATGTTGAAA
ATGTCTAACCTTGATGTTCTCACTGGACTTCAAGGCCAGGTTCGAGTCAATTGCTCACTACCTGTGTCTTCTTAA

Retrieve as FASTA