Entry information : GmPrx[P]246 (Glyma14g15240.1)
Entry ID 9039
Creation 2011-07-04 (Qiang Li)
Last sequence changes 2011-10-12 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Qiang Li
Last annotation changes 2011-12-02 (Qiang Li)
Peroxidase information: GmPrx[P]246 (Glyma14g15240.1)
Name (synonym) GmPrx[P]246 (Glyma14g15240.1)
Class Class III peroxidase     [Orthogroup: Prx041]*
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx[P]246
start..stop
S start..stop
GmPrx105 405 1e-144 1..226 77..327
MtPrx90 358 6e-126 1..226 77..327
GmPrx[P]313 348 1e-123 9..226 1..235
GmPrx[P]219 318 1e-111 1..225 1..240
Literature and cross-references GmPrx[P]246 (Glyma14g15240.1)
DNA ref. Phytozome 12:   Gm14 (16131713..16130540)
Protein sequence: GmPrx[P]246 (Glyma14g15240.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   225
PWM (Da):   %s   25119.78  
PI (pH):   %s   6.87
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
LILDNVEGIT SEKLAGPNLN SLRGFEVKHK IKYLLEEECH ITVSCADILA MSTHDAVELR GGPRWEVLLG RMDALELSFS GANILIPAPS HTIGRARCVS FKQSIYDAKD EYHYGYDNYK 
*YISFRKILR SICPVEGRDN KFAPLDFQTP KKxFDNHYFI NILEGKGLLG SDNVLSSHDL DGKITEQVWA YASNEKLLFA SFAKSMIKMG NMNVLTGNEG EIRRNC 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from Phytozome (Stops in frame, 5' end is missing).
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CTGATTTTGG ACAATGTGGA GGGCATCACA AGTGAAAAGC TGGCTGGACC AAATCTAAAC TCTTTACGTG GATTTGAGGT CAAACACAAG ATAAAGTATT TGCTTGAAGA AGAATGTCAT  ATTACTGTTT CATGTGCTGA CATCCTTGCC ATGTCGACAC ATGATGCTGT TGAATTGGTA AACACTGCTT TGTCACAGGG GTCAAATGAA TGTAGTTATA TTTTTATTTT TATTTTTCTT  TACAACAATT TCTATCATTT GTTTTTGAAG AGAGGAGGAC CAAGATGGGA AGTCTTGCTT GGAAGGATGG ATGCTCTCGA GTTAAGTTTC AGTGGAGCTA ACATATTAAT TCCTGCTCCA  AATTCATCTT TGGGGGTTCT CATAGATAAT TTTAAGCATC AAGGCCTCGA CATAGAAGAA TTGGTAACTC TATCTGGTAT ATTTATTATT TTGACAACAT ATATATACAA CTTTCTAAAT  TGTTGTTAGC ACAATTTTCT AATCAAAATT AGTGTCCCAC ATCTTCATAA AAAAAATAGT GACCCACCTT AATGAATTAT TGAAATGAAA CTAATTTTTA ATTGAAAAAT AGCACAAACA  AAACCCCAAT TGTAATTGAT GAATAACACA AACAATACCT ATAAATACTC TAATTTTGTC CTTATAATTT GTTCAAATTA GTTTAATCAA ATGTTAATAT TTTGGGGCTC TGACAAAGGA  AGAAGAGATT AAGCACGTAG AGTTCTTGCT TGACAAAATA CATGTAGCCA TACTATAGGA AGAGCAAGAT GTGTAAGCTT CAAGCAGAGC ATATATGATG CAAAAGACGA ATATCACTAT  GGCTATGATA ACTACAAATG ATACATAAGT TTCAGGAAAA TCCTGCGGTC CATATGCCCT GTTGAGGGAA GGGACAATAA ATTTGCACCC TTGGATTTTC AAACCCCAAA AAAGAnnTTT  GACAATCACT ACTTCATAAA CATTCTGGAA GGGAAAGGCT TGTTAGGTTC TGACAATGTT CTTAGCAGCC ATGACTTAGA TGGAAAGATT ACAGAGCAGG TGTGGGCTTA CGCCTCTAAT 
GAAAAACTTT TGTTTGCTTC TTTTGCTAAA TCTATGATTA AAATGGGAAA CATGAATGTT CTTACAGGAA ATGAGGGGGA AATTAGGAGG AATTGT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CTGATTTTGG ACAATGTGGA GGGCATCACA AGTGAAAAGC TGGCTGGACC AAATCTAAAC TCTTTACGTG GATTTGAGGT CAAACACAAG ATAAAGTATT TGCTTGAAGA AGAATGTCAT  ATTACTGTTT CATGTGCTGA CATCCTTGCC ATGTCGACAC ATGATGCTGT TGAATTGAGA GGAGGACCAA GATGGGAAGT CTTGCTTGGA AGGATGGATG CTCTCGAGTT AAGTTTCAGT  GGAGCTAACA TATTAATTCC TGCTCCAAGC CATACTATAG GAAGAGCAAG ATGTGTAAGC TTCAAGCAGA GCATATATGA TGCAAAAGAC GAATATCACT ATGGCTATGA TAACTACAAA  TGATACATAA GTTTCAGGAA AATCCTGCGG TCCATATGCC CTGTTGAGGG AAGGGACAAT AAATTTGCAC CCTTGGATTT TCAAACCCCA AAAAAGAnnT TTGACAATCA CTACTTCATA  AACATTCTGG AAGGGAAAGG CTTGTTAGGT TCTGACAATG TTCTTAGCAG CCATGACTTA GATGGAAAGA TTACAGAGCA GGTGTGGGCT TACGCCTCTA ATGAAAAACT TTTGTTTGCT 
TCTTTTGCTA AATCTATGAT TAAAATGGGA AACATGAATG TTCTTACAGG AAATGAGGGG GAAATTAGGA GGAATTGT 

Retrieve as FASTA