Entry information : MePrx73 ( cassava4.1_023964m)
Entry ID 9130
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2011-12-01 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-24 (Christophe Dunand)
Peroxidase information: MePrx73 ( cassava4.1_023964m)
Name (synonym) MePrx73 ( cassava4.1_023964m)
Class Class III peroxidase    [Orthogroup: Prx014]
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Manihot
Organism Manihot esculenta (cassava)    [TaxId: 3983 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MePrx73
start..stop
S start..stop
MePrx66 637 0 1..323 1..323
MePrx130 635 0 1..322 1..322
RcPrx18 546 0 1..323 1..325
RcPrx88 545 0 1..323 1..322
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1654579..1654785 207 N° 2 1654247..1654438 192 N° 3 1653995..1654160 166 N° 4 1653495..1653898 404
complement(join(1653495..1653898,1653995..1654160,1654247..1654438,1654579..1654 785))


exon

Literature and cross-references MePrx73 ( cassava4.1_023964m)
DNA ref. Phytozome 12:   scaffold11998 (1654785..1653495)
Protein sequence: MePrx73 ( cassava4.1_023964m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (302)
PWM (Da):   %s   35060.73 (32786.5) Transmb domain:   %s   i5-24o
PI (pH):   %s   7.39 (7.06) Peptide Signal:   %s   cut: 22 range:22-323
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKTHFLFVCVIVLSVIGVCQGGALRKKFYKTSCPQAEDIVRRITWSHVLSNPNLPAKLLRMHFHDCFVRGCDGSILLNSTATSTAEKDAIPNLTLSGFDTIDAIKSEIENACPGVVSCADILALAARDSVSFQFQKPMWEVLTGRRDGNVSLASDVFSNLPSPFFDFSTLLKNFKNKGLNVHDLVVLSGGHTIGVGHCNLFSNRLYNFTGKGDQDPSLNSTYAAFLKTKCQSLSDSTTTVEMDPDSSLNFDGNYFVILKENKGLFQSDAALLTNKIARNIAGELVDSGAFFVEFAQSMKRLGAVQVLTGAEGEIRNKCSVVN

Retrieve as FASTA  
Remarks Complete sequence from genomic '(3 introns).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGACCCATTTTCTCTTTGTATGTGTTATTGTTTTGAGTGTGATTGGGGTTTGTCAAGGAGGTGCTCTGAGGAAGAAATTCTACAAGACATCATGTCCTCAAGCAGAGGATATTGTC
AGAAGGATCACCTGGAGCCATGTCTTAAGCAACCCTAACTTGCCTGCAAAGCTTTTGAGAATGCATTTTCATGACTGTTTTGTTAGG
GTAAGACTCATGCATGCATGCTTATGTTAGTCT
AAATATATAGTCTTACACTTGAAGATTAAGATGCTCCCTCAAAGTTTTCTTGTTTCCAAAAAGAAAGAATTCATGACTAACTCACGCATTTGGAAATTAAATTTCAGGGCTGCGACGGCT
CTATTTTACTAAATTCCACTGCTACTAGCACTGCGGAGAAAGATGCGATTCCAAATCTAACTTTATCAGGATTTGATACTATTGATGCCATAAAATCAGAGATAGAGAATGCATGTCCAG
GAGTTGTATCCTGTGCTGACATTTTGGCCTTGGCCGCTAGGGACTCGGTTTCCTTCCAA
GTAAGTATAAGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTCTTGTATGTAGCT
CAAAACGCTTATGCTTCCACTGTAGTTCCAAAAGCCAATGTGGGAAGTACTTACTGGCAGAAGAGACGGCAACGTTTCATTAGCTTCCGATGTCTTTTCTAACCTTCCTTCGCCCTTCTT
CGACTTCTCCACTCTCTTGAAAAATTTCAAGAACAAGGGTCTCAACGTCCATGATCTAGTTGTACTGTCAG
GTATATAATTTATATTGCTATAACGAGGAAATTACTTTAAAAACATGAT
TATATCCTTGGATATCAGGGACTAATAAATACATTTGAATTATGTAGGCGGACACACCATTGGAGTAGGCCACTGTAATCTCTTCAGCAACAGGCTCTACAACTTCACAGGCAAAGGCGA
CCAGGACCCTTCTCTGAACTCCACATACGCAGCTTTCTTGAAGACCAAATGCCAAAGTCTCAGTGACTCGACCACCACCGTAGAGATGGATCCTGACAGCTCTCTAAACTTCGATGGCAA
TTACTTCGTTATCCTCAAGGAGAACAAGGGTCTATTCCAATCCGATGCAGCCCTTCTAACGAACAAGATCGCAAGAAATATTGCTGGAGAGTTGGTTGATTCGGGAGCTTTCTTCGTAGA
GTTTGCACAGTCAATGAAAAGGTTGGGAGCAGTTCAAGTTCTTACTGGCGCTGAAGGGGAGATCAGGAACAAGTGCAGTGTAGTCAATGCC

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGACCCATTTTCTCTTTGTATGTGTTATTGTTTTGAGTGTGATTGGGGTTTGTCAAGGAGGTGCTCTGAGGAAGAAATTCTACAAGACATCATGTCCTCAAGCAGAGGATATTGTC
AGAAGGATCACCTGGAGCCATGTCTTAAGCAACCCTAACTTGCCTGCAAAGCTTTTGAGAATGCATTTTCATGACTGTTTTGTTAGG
GGCTGCGACGGCTCTATTTTACTAAATTCCACT
GCTACTAGCACTGCGGAGAAAGATGCGATTCCAAATCTAACTTTATCAGGATTTGATACTATTGATGCCATAAAATCAGAGATAGAGAATGCATGTCCAGGAGTTGTATCCTGTGCTGAC
ATTTTGGCCTTGGCCGCTAGGGACTCGGTTTCCTTCCAA
TTCCAAAAGCCAATGTGGGAAGTACTTACTGGCAGAAGAGACGGCAACGTTTCATTAGCTTCCGATGTCTTTTCTAACCTT
CCTTCGCCCTTCTTCGACTTCTCCACTCTCTTGAAAAATTTCAAGAACAAGGGTCTCAACGTCCATGATCTAGTTGTACTGTCAG
GCGGACACACCATTGGAGTAGGCCACTGTAATCTC
TTCAGCAACAGGCTCTACAACTTCACAGGCAAAGGCGACCAGGACCCTTCTCTGAACTCCACATACGCAGCTTTCTTGAAGACCAAATGCCAAAGTCTCAGTGACTCGACCACCACCGTA
GAGATGGATCCTGACAGCTCTCTAAACTTCGATGGCAATTACTTCGTTATCCTCAAGGAGAACAAGGGTCTATTCCAATCCGATGCAGCCCTTCTAACGAACAAGATCGCAAGAAATATT
GCTGGAGAGTTGGTTGATTCGGGAGCTTTCTTCGTAGAGTTTGCACAGTCAATGAAAAGGTTGGGAGCAGTTCAAGTTCTTACTGGCGCTGAAGGGGAGATCAGGAACAAGTGCAGTGTA
GTCAATGCC

Retrieve as FASTA