Entry information : MguPrx[P]83 (mgv1a021416m)
Entry ID 9257
Creation 2011-07-02 (Qiang Li)
Last sequence changes 2011-12-13 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2011-12-13 (Qiang Li)
Peroxidase information: MguPrx[P]83 (mgv1a021416m)
Name (synonym) MguPrx[P]83 (mgv1a021416m)
Class Class III peroxidase     [Orthogroup: Prx169]*
Taxonomy Eukaryota Viridiplantae Streptophyta Phrymaceae Mimulus
Organism Mimulus guttatus    [TaxId: 4155 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MguPrx[P]83
start..stop
S start..stop
MguPrx99 233 6e-78 14..142 196..330
MguPrx[P]104 231 1e-77 14..142 196..330
MguPrx78 158 5e-49 6..140 183..323
MguPrx37 97 3e-25 3..140 174..325
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 59760..60146 387  
join(59760..60146)


exon

Literature and cross-references MguPrx[P]83 (mgv1a021416m)
DNA ref. Phytozome 12:   scaffold_109 (59760..60146)
Protein sequence: MguPrx[P]83 (mgv1a021416m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   141
PWM (Da):   %s   16095.16  
PI (pH):   %s   8.83
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
PPKLFFSENN FFWLVGAHTL GTSHCATIQY RFDAPWIINT DQEFYKKLQK ICPKGAASNF NTSLPNDRTP YVFDADIYVE SLRGRGLLVT DVAHR*DRPE IYFRQRLFFK TFSSAFVKLS 
TADVLTGNDG EIRRQCDKLN GV 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from phytozome (3' end is missing. Gaps in frame. Stop in frame).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CTTGTAGGTG CTCATACTCT TGGAACTTCT CATTGTGCCA CTATACAATA TCGTTTCGAC GCTCCGTGGA TTATAAATAC GGACCAAGAA TTCTATAAGA AATTGCAAAA GATTTGTCCG  AAAGGAGCAG CATCTAATTT TAATACGTCG TTACCTAACG ATCGCACACC GTACGTATTC GATGCAGATA TATATGTGGA ATCATTACGT GGGAGGGGGC TATTAGTGAC CGATGTAGCT  CACCGCTGAG ATCGCCCCGA AATTTATTTT CGACAAAGAT TATTTTTCAA GACATTTTCA TCTGCTTTTG TTAAACTTTC AACCGCAGAC GTTTTAACGG GAAACGATGG CGAAATCCGA 
AGACAGTGTG ATAAGTTGAA TGGAGTT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CTTGTAGGTG CTCATACTCT TGGAACTTCT CATTGTGCCA CTATACAATA TCGTTTCGAC GCTCCGTGGA TTATAAATAC GGACCAAGAA TTCTATAAGA AATTGCAAAA GATTTGTCCG  AAAGGAGCAG CATCTAATTT TAATACGTCG TTACCTAACG ATCGCACACC GTACGTATTC GATGCAGATA TATATGTGGA ATCATTACGT GGGAGGGGGC TATTAGTGAC CGATGTAGCT  CACCGCTGAG ATCGCCCCGA AATTTATTTT CGACAAAGAT TATTTTTCAA GACATTTTCA TCTGCTTTTG TTAAACTTTC AACCGCAGAC GTTTTAACGG GAAACGATGG CGAAATCCGA 
AGACAGTGTG ATAAGTTGAA TGGAGTT 

Retrieve as FASTA