Entry information : RcPrx22 (29676.m001629)
Entry ID 9350
Creation 2011-06-30 (Qiang Li)
Last sequence changes 2014-01-09 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2014-01-09 (Qiang Li)
Peroxidase information: RcPrx22 (29676.m001629)
Name (synonym) RcPrx22 (29676.m001629)
Class Class III peroxidase     [Orthogroup: Prx022]*
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Ricinus
Organism Ricinus communis    [TaxId: 3988 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RcPrx22
start..stop
S start..stop
MePrx30 473 4e-170 1..295 1..294
PtPrx58 454 5e-163 1..295 1..292
NtPrx31-1A 454 7e-163 13..295 13..297
CclPrx59 451 3e-161 2..295 5..299
Literature and cross-references RcPrx22 (29676.m001629)
DNA ref. Phytozome 12:   29676 (150156..148632)
Protein sequence: RcPrx22 (29676.m001629)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   295 (270)
PWM (Da):   %s   32207.74 (29209.3) Transmb domain:   %s   o10-32i
PI (pH):   %s   4.76 (4.63) Peptide Signal:   %s   cut: 26 range:26-295
Sequence
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Send to Peroxiscan
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MEHTNYKLPF VYLFCLMFLS AFVTCQLDYR YYDGTCPNLT RIVRYGVWSA ISNDTRMAAS LLRLHFHDCF VNGCEGSVLL DGDNGEKSSL ANQNSARGFE VIDNIKATLE RFCPGTVSCA  DILTLAAREA VYLAGGPYWS IPLGRRDGLT ASQSAADEQL PSPFESLQNI TAKFTAKGLE LKDVVVLSTG GHTLGFAQCF TFKPRLFDFG GSGKPDPALD TSLLQSLQGV CPNQADSDTN 
LAPLDSVTSS RFDNSYYKLL LNNSGLLQSD QALMSDNTAA SMVSYYSQYP YLFSR 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from phytozome (3' end is missing dueto XXXXXX in frame because of NNNNNNN in DNA).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGCATA CAAACTATAA ACTCCCCTTT GTTTACTTGT TTTGCCTCAT GTTCTTGAGT GCTTTTGTCA CCTGCCAACT TGATTATAGG TACTATGATG GCACTTGTCC TAACCTGACG  AGAATTGTTC GCTATGGTGT TTGGTCAGCT ATATCAAATG ACACCAGGAT GGCAGCCTCT CTCTTGAGGC TTCACTTCCA CGATTGCTTT GTTAACGTAA TCAAATCCAT TACTTGTTTT  ATCATTCTGA CTTTATCCTT AGGAAAATGG AAGAGAGAAT AGTTAACAAA AAGTGCTTAG TTAGTAATTT TGCGAAATTT AGCTGCTGAA ACTGACTGTC GACTGTTTCT TGTTATGTAT  ATATAGGGAT GTGAAGGATC TGTGCTACTT GATGGTGATA ATGGGGAAAA AAGTTCATTG GCAAATCAAA ATTCAGCCAG AGGATTTGAG GTTATTGACA ATATTAAGGC TACTTTGGAG  AGGTTCTGTC CTGGCACTGT TTCTTGTGCT GATATACTGA CTCTTGCAGC AAGGGAGGCA GTTTATCTTG TAAGAAATTG AAGCTCTTCT TGTATGCTTG TATGTCATAG AATATTATTG  TTGTATTCAC ATTCACCATT TTTCTTTCTC ATCTTCCTTA GGCTGGAGGC CCTTATTGGA GTATACCTTT GGGTCGCAGA GATGGTCTAA CAGCAAGTCA GAGTGCTGCT GATGAACAAC  TCCCATCACC TTTTGAGTCT TTACAGAACA TAACTGCAAA ATTTACCGCA AAGGGTCTGG AATTGAAGGA TGTCGTCGTG CTCTCAnnnG GTTTGTTTTC AATGGCATTG CTTTCACGCC  ACTTAAAAAT AAAAAAATTA AAGTTGAGAA CTTGGCTTGG ATGGAACTAA AGAAAAAAAA GCTGATTGCA GATTCATATA CAACAATTCA CTGTGCAAGG AATAGCTTGT TAAAAATTTT  AATCTAGAAG ATGATTCCAG AACCAACTTC GGACATATAT AGAACATATA GCCTAGTGAC CGAGTGCTTG TCTTATATGT TATTGCTTCA ACATCTTTCT TCATCTCATG CATACAAATA  GACTAATCAA GGCAGCATTT CATAACAAAT GATAGACGAT TCTTTATGCT AAATACAGGC GGACACACTC TCGGCTTTGC TCAGTGCTTC ACATTCAAAC CAAGGCTTTT CGACTTTGGT  GGCTCTGGCA AACCTGATCC AGCACTAGAT ACATCACTTC TTCAAAGTCT GCAAGGTGTT TGTCCAAACC AAGCAGATTC TGATACAAAT TTGGCTCCTT TAGATTCTGT CACTTCTTCC  AGATTCGACA ACTCTTATTA CAAGCTTCTT CTGAACAATT CCCnnGGGCT ACTCCAATCA GACCAAGCTC TCATGAGTGA CAATACAGCT GCTTCTATGG TCAGTTACTA CAGCCAGTAC 
CCTTACTTGT TCTCCAGAG 

Retrieve as FASTA