Entry information : SiPrx124 (Si030495m)
Entry ID 9469
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-15 (Qiang Li)
Peroxidase information: SiPrx124 (Si030495m)
Name (synonym) SiPrx124 (Si030495m)
Class Class III peroxidase    [Orthogroup: Prx257]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx124
start..stop
S start..stop
SbPrx01 474 5e-170 33..327 39..339
MePrx127 314 5e-107 31..328 23..325
MePrx88 312 2e-106 31..327 18..319
AcoPrx32 312 4e-106 17..327 9..325
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 46986843..46987829 987  
join(46986843..46987829)


exon

Literature and cross-references SiPrx124 (Si030495m)
DNA ref. Phytozome 11:   scaffold_2 (46986843..46987829)
Protein sequence: SiPrx124 (Si030495m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (297)
PWM (Da):   %s   35045.5 (31925.9)  
PI (pH):   %s   6.73 (5.42) Peptide Signal:   %s   cut: 32 range:32-328
Sequence
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Send to Peroxiscan
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MRMAPRGSNG SGGGTKLLLC LLLVACTGAA GQGLRVGFYQ QSCPDAESIV RNVTWPAAAA DPSLAAKLLR LFFHDCFPQG CDASVLLDGR GTEKAAGPNL SLGGLEVIDA AKAALERSCP  GTVSCADAVA LATRDAVSFQ FGRLLWQVET GRRDSRFSDE ADGTKLPNPE YVFPILRDSF ARRGLGVADL VALSGAHTLG RTTCMFVSPR LYTFQGNGGV DPFIEPRYAR ELMGQCTSMA 
SANRVVMDPG SEFAFDTSYY RAIKANRGVL LTDSVLTHDD EAARLVDEMQ DLGKFLAAFA ASIQKMGAMD VLTGSQGEIR RNCRVVNY* 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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ATGCGTATGG CTCCTCGGGG TAGTAATGGC AGCGGCGGCG GCACCAAGCT GTTGCTGTGC TTGCTGCTCG TCGCGTGCAC CGGGGCTGCG GGGCAGGGGC TCCGGGTGGG GTTCTACCAG  CAGAGCTGCC CGGACGCGGA GTCCATCGTG AGGAACGTCA CCTGGCCTGC GGCGGCCGCC GACCCCAGCC TCGCCGCCAA GCTTCTCCGC CTCTTCTTCC ACGACTGTTT CCCGCAGGGT  TGCGACGCGT CGGTGCTGCT GGACGGCCGT GGCACGGAGA AGGCGGCGGG CCCGAACCTG TCGCTGGGCG GGCTGGAGGT GATCGACGCG GCCAAGGCGG CGCTCGAGCG GTCCTGCCCG  GGCACCGTCT CCTGCGCCGA CGCCGTGGCG CTCGCCACCC GTGACGCCGT CTCGTTCCAG TTCGGGCGGC TGCTGTGGCA GGTGGAGACG GGGCGGCGCG ACTCCCGCTT CTCCGACGAG  GCCGACGGCA CCAAGCTCCC CAACCCGGAG TACGTGTTCC CGATCCTCAG GGACTCCTTC GCCCGGCGCG GCCTCGGCGT CGCCGACCTC GTCGCGCTCT CCGGCGCGCA CACGCTGGGC  CGGACCACCT GCATGTTCGT GTCCCCGAGG CTCTACACCT TCCAGGGCAA CGGCGGGGTG GACCCGTTCA TCGAGCCCAG GTACGCGCGG GAGCTGATGG GGCAGTGCAC GAGCATGGCG  TCGGCGAACA GGGTCGTCAT GGACCCCGGC AGCGAGTTCG CCTTCGACAC CAGCTACTAC AGGGCCATCA AGGCCAACCG CGGCGTGCTC CTCACGGACT CCGTGCTCAC GCACGACGAC  GAGGCGGCGA GGCTCGTCGA CGAGATGCAG GACCTGGGCA AGTTCCTCGC CGCCTTCGCC GCGTCCATCC AGAAGATGGG CGCCATGGAC GTGCTCACCG GCAGCCAAGG CGAGATCAGG 
AGGAACTGCC GTGTCGTCAA CTACTAG 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGTATGG CTCCTCGGGG TAGTAATGGC AGCGGCGGCG GCACCAAGCT GTTGCTGTGC TTGCTGCTCG TCGCGTGCAC CGGGGCTGCG GGGCAGGGGC TCCGGGTGGG GTTCTACCAG  CAGAGCTGCC CGGACGCGGA GTCCATCGTG AGGAACGTCA CCTGGCCTGC GGCGGCCGCC GACCCCAGCC TCGCCGCCAA GCTTCTCCGC CTCTTCTTCC ACGACTGTTT CCCGCAGGGT  TGCGACGCGT CGGTGCTGCT GGACGGCCGT GGCACGGAGA AGGCGGCGGG CCCGAACCTG TCGCTGGGCG GGCTGGAGGT GATCGACGCG GCCAAGGCGG CGCTCGAGCG GTCCTGCCCG  GGCACCGTCT CCTGCGCCGA CGCCGTGGCG CTCGCCACCC GTGACGCCGT CTCGTTCCAG TTCGGGCGGC TGCTGTGGCA GGTGGAGACG GGGCGGCGCG ACTCCCGCTT CTCCGACGAG  GCCGACGGCA CCAAGCTCCC CAACCCGGAG TACGTGTTCC CGATCCTCAG GGACTCCTTC GCCCGGCGCG GCCTCGGCGT CGCCGACCTC GTCGCGCTCT CCGGCGCGCA CACGCTGGGC  CGGACCACCT GCATGTTCGT GTCCCCGAGG CTCTACACCT TCCAGGGCAA CGGCGGGGTG GACCCGTTCA TCGAGCCCAG GTACGCGCGG GAGCTGATGG GGCAGTGCAC GAGCATGGCG  TCGGCGAACA GGGTCGTCAT GGACCCCGGC AGCGAGTTCG CCTTCGACAC CAGCTACTAC AGGGCCATCA AGGCCAACCG CGGCGTGCTC CTCACGGACT CCGTGCTCAC GCACGACGAC  GAGGCGGCGA GGCTCGTCGA CGAGATGCAG GACCTGGGCA AGTTCCTCGC CGCCTTCGCC GCGTCCATCC AGAAGATGGG CGCCATGGAC GTGCTCACCG GCAGCCAAGG CGAGATCAGG 
AGGAACTGCC GTGTCGTCAA CTACTAG 

Retrieve as FASTA