Entry information : SiPrx125 (Si030497m)
Entry ID 9470
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-15 (Qiang Li)
Peroxidase information: SiPrx125 (Si030497m)
Name (synonym) SiPrx125 (Si030497m)
Class Class III peroxidase    [Orthogroup: Prx011]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx125
start..stop
S start..stop
ZmPrx125 535 0 23..328 17..320
HvPrx35 516 0 8..328 4..326
OsPrx98 511 0 22..328 25..330
BdiPrx35 483 2e-173 27..328 29..329
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 293892..294878 987  
join(293892..294878)


exon

Literature and cross-references SiPrx125 (Si030497m)
DNA ref. Phytozome 11:   scaffold_2 (293892..294878)
Protein sequence: SiPrx125 (Si030497m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (302)
PWM (Da):   %s   34251.41 (31836.2)  
PI (pH):   %s   8.33 (8.40) Peptide Signal:   %s   cut: 27 range:27-328
Sequence
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Send to Peroxiscan
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MATGSSSVSP AAAALLVLAA SATVCAAQLR RDHYAGVCPD VESIVRGAVA KKYRETFITV GATLHLFFHD CFVTGCDASV LVASTPNNTA EKDHPVNLAL AGDGFDTVIR ARAAVDAVPR  CRGRVSCADV LAMATRDAIA LAGGPSYAVE LGRLDGLSST ASSVDGKLAP PSFNLDQLTA LFATNGLSRT DMIALSAGHT VGFAHCSTFA GRIQGAAAPD PTLNRSLAAR LREWCPAGVD 
PRIAVTMDVV TPRVFDNQYF KNLQDGMGLL ASDQVLYTDP RSRPTVDAWA KSSVAFSQAF VTAITKMGRI GVKTGAQGNI RRNCAVLN* 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCACCG GCAGCAGCAG CGTAAGCCCC GCGGCGGCGG CGCTCCTGGT GCTGGCAGCG AGCGCCACGG TGTGCGCGGC GCAGCTCCGG CGCGACCACT ACGCCGGCGT GTGCCCGGAC  GTGGAGTCCA TCGTGCGCGG CGCCGTGGCC AAGAAGTATC GGGAGACGTT CATCACGGTG GGCGCCACGT TGCACCTCTT CTTCCACGAC TGCTTCGTCA CCGGCTGCGA CGCCTCCGTG  CTCGTGGCGT CCACGCCCAA CAACACCGCC GAGAAGGACC ACCCCGTGAA CCTCGCCCTC GCCGGGGACG GCTTCGACAC CGTCATCCGC GCCAGGGCCG CCGTCGACGC CGTGCCGCGG  TGCCGGGGCC GTGTCTCCTG CGCCGACGTC CTCGCCATGG CCACCCGGGA CGCCATCGCG CTCGCCGGCG GGCCCTCGTA CGCGGTCGAG CTCGGCCGGC TCGACGGCCT GAGCTCCACG  GCGAGCAGCG TCGACGGCAA GCTCGCGCCG CCGTCGTTCA ACCTGGACCA GCTCACCGCG CTGTTCGCCA CCAACGGGCT GTCGCGGACC GACATGATCG CGCTCTCGGC GGGGCACACG  GTGGGGTTCG CGCACTGCAG CACCTTCGCC GGCCGGATCC AGGGGGCGGC GGCGCCGGAC CCGACGCTGA ACCGGAGCCT TGCGGCGCGG CTGCGGGAGT GGTGCCCGGC GGGGGTGGAC  CCGCGGATCG CCGTCACCAT GGACGTGGTC ACGCCGCGGG TGTTCGACAA CCAGTACTTC AAGAACCTGC AGGACGGGAT GGGCCTGCTC GCGTCCGACC AGGTGCTGTA CACGGACCCG  AGGTCCAGGC CCACGGTTGA TGCCTGGGCC AAGAGCAGCG TGGCGTTCAG CCAAGCCTTC GTGACTGCAA TCACCAAGAT GGGCCGGATC GGGGTCAAGA CTGGGGCCCA AGGGAACATC 
CGCCGCAACT GCGCAGTGCT CAATTGA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCACCG GCAGCAGCAG CGTAAGCCCC GCGGCGGCGG CGCTCCTGGT GCTGGCAGCG AGCGCCACGG TGTGCGCGGC GCAGCTCCGG CGCGACCACT ACGCCGGCGT GTGCCCGGAC  GTGGAGTCCA TCGTGCGCGG CGCCGTGGCC AAGAAGTATC GGGAGACGTT CATCACGGTG GGCGCCACGT TGCACCTCTT CTTCCACGAC TGCTTCGTCA CCGGCTGCGA CGCCTCCGTG  CTCGTGGCGT CCACGCCCAA CAACACCGCC GAGAAGGACC ACCCCGTGAA CCTCGCCCTC GCCGGGGACG GCTTCGACAC CGTCATCCGC GCCAGGGCCG CCGTCGACGC CGTGCCGCGG  TGCCGGGGCC GTGTCTCCTG CGCCGACGTC CTCGCCATGG CCACCCGGGA CGCCATCGCG CTCGCCGGCG GGCCCTCGTA CGCGGTCGAG CTCGGCCGGC TCGACGGCCT GAGCTCCACG  GCGAGCAGCG TCGACGGCAA GCTCGCGCCG CCGTCGTTCA ACCTGGACCA GCTCACCGCG CTGTTCGCCA CCAACGGGCT GTCGCGGACC GACATGATCG CGCTCTCGGC GGGGCACACG  GTGGGGTTCG CGCACTGCAG CACCTTCGCC GGCCGGATCC AGGGGGCGGC GGCGCCGGAC CCGACGCTGA ACCGGAGCCT TGCGGCGCGG CTGCGGGAGT GGTGCCCGGC GGGGGTGGAC  CCGCGGATCG CCGTCACCAT GGACGTGGTC ACGCCGCGGG TGTTCGACAA CCAGTACTTC AAGAACCTGC AGGACGGGAT GGGCCTGCTC GCGTCCGACC AGGTGCTGTA CACGGACCCG  AGGTCCAGGC CCACGGTTGA TGCCTGGGCC AAGAGCAGCG TGGCGTTCAG CCAAGCCTTC GTGACTGCAA TCACCAAGAT GGGCCGGATC GGGGTCAAGA CTGGGGCCCA AGGGAACATC 
CGCCGCAACT GCGCAGTGCT CAATTGA 

Retrieve as FASTA