Entry information : SiPrx143 (Si033034m)
Entry ID 9485
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-15 (Qiang Li)
Peroxidase information: SiPrx143 (Si033034m)
Name (synonym) SiPrx143 (Si033034m)
Class Class III peroxidase    [Orthogroup: Prx096]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx143
start..stop
S start..stop
SiPrx119 526 0 4..347 8..355
SbPrx42 509 0 1..347 1..360
ZmPrx79 506 0 48..347 63..362
SbPrx43 488 2e-174 46..347 64..364
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 46737435..46738484 1050  
join(46737435..46738484)


exon

Literature and cross-references SiPrx143 (Si033034m)
DNA ref. Phytozome 11:   scaffold_2 (46737435..46738484)
Protein sequence: SiPrx143 (Si033034m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   351 (332)
PWM (Da):   %s   37461.23 (35660.1)  
PI (pH):   %s   9.06 (8.72) Peptide Signal:   %s   cut: 19 range:19-350
Sequence
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Send to Peroxiscan
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MARLGVLILA ALLGAVAAQA AGSYGGGNYS PSPSPPAQTP PPPPARPRLR FGFYKHSCPP AEVIVRDAVR NALLVNPGIG AGLIRMAFHD CFVQGCDGSV LLDPTPANPR PEKLGPPNFP  SLRGFEVIDA AKAALERYCP GVVSCADVVQ YAARDAAFFL SGFKVDYRLP AGRFDGSVSL ESESLAFLPP PFFNLSQLIT SFQVKGMNID DLVVLSGSHT IGRSHCSSFS DRISTPPSDM 
DPGLATALKQ QCPANPNFTN DPTVVQDVVT ADKLDNQYYK NVLNHKVLFN SDAALLTSTP TARKVVENAF VRGRWEKKFA KAMVKMAAIE VKTAANGEVR KNCRVVNSKP * 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCAGGC TTGGCGTCCT GATCTTGGCT GCGCTGCTCG GCGCCGTCGC TGCCCAAGCG GCAGGGTCCT ACGGCGGCGG CAATTATTCT CCGAGCCCAA GCCCGCCCGC CCAGACTCCT  CCGCCGCCTC CTGCTCGTCC GCGGCTCAGG TTCGGGTTCT ACAAGCACTC GTGCCCTCCC GCGGAGGTCA TAGTCAGGGA CGCCGTCCGG AATGCCCTCC TCGTCAACCC CGGCATCGGC  GCCGGCCTCA TCCGCATGGC CTTCCACGAC TGCTTCGTCC AGGGCTGCGA CGGCTCCGTG CTGCTCGACC CGACGCCGGC GAACCCGCGC CCGGAGAAGC TCGGCCCGCC CAACTTCCCG  AGCCTGCGTG GCTTCGAGGT CATTGACGCC GCCAAGGCCG CGCTCGAGAG GTACTGCCCC GGCGTCGTCT CCTGCGCCGA CGTCGTCCAG TACGCCGCCC GCGACGCCGC TTTCTTCCTC  AGTGGATTTA AAGTCGACTA CAGGCTCCCC GCGGGGCGAT TTGACGGCAG CGTGTCGCTC GAGAGCGAGT CGCTCGCCTT CCTGCCCCCG CCATTCTTCA ACCTCTCGCA GCTCATCACC  AGCTTCCAAG TCAAGGGCAT GAACATCGAC GACCTCGTCG TGCTCTCCGG ATCCCACACC ATCGGCCGCT CCCACTGCTC CTCCTTCTCC GACCGCATCT CCACGCCGCC CTCCGACATG  GACCCGGGCC TCGCCACCGC GCTCAAGCAG CAGTGCCCGG CGAACCCCAA CTTCACCAAC GACCCCACGG TGGTGCAGGA CGTCGTCACC GCCGACAAGC TGGACAACCA GTACTACAAG  AACGTCCTGA ACCACAAGGT GCTCTTCAAC TCCGACGCGG CGCTTCTGAC GTCGACGCCG ACGGCGAGGA AGGTCGTGGA GAACGCGTTC GTCCGCGGGA GGTGGGAGAA GAAGTTCGCC 
AAGGCCATGG TGAAGATGGC CGCCATCGAG GTCAAGACCG CCGCCAACGG CGAGGTCAGG AAGAACTGCC GCGTCGTCAA CAGCAAGCCG 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCAGGC TTGGCGTCCT GATCTTGGCT GCGCTGCTCG GCGCCGTCGC TGCCCAAGCG GCAGGGTCCT ACGGCGGCGG CAATTATTCT CCGAGCCCAA GCCCGCCCGC CCAGACTCCT  CCGCCGCCTC CTGCTCGTCC GCGGCTCAGG TTCGGGTTCT ACAAGCACTC GTGCCCTCCC GCGGAGGTCA TAGTCAGGGA CGCCGTCCGG AATGCCCTCC TCGTCAACCC CGGCATCGGC  GCCGGCCTCA TCCGCATGGC CTTCCACGAC TGCTTCGTCC AGGGCTGCGA CGGCTCCGTG CTGCTCGACC CGACGCCGGC GAACCCGCGC CCGGAGAAGC TCGGCCCGCC CAACTTCCCG  AGCCTGCGTG GCTTCGAGGT CATTGACGCC GCCAAGGCCG CGCTCGAGAG GTACTGCCCC GGCGTCGTCT CCTGCGCCGA CGTCGTCCAG TACGCCGCCC GCGACGCCGC TTTCTTCCTC  AGTGGATTTA AAGTCGACTA CAGGCTCCCC GCGGGGCGAT TTGACGGCAG CGTGTCGCTC GAGAGCGAGT CGCTCGCCTT CCTGCCCCCG CCATTCTTCA ACCTCTCGCA GCTCATCACC  AGCTTCCAAG TCAAGGGCAT GAACATCGAC GACCTCGTCG TGCTCTCCGG ATCCCACACC ATCGGCCGCT CCCACTGCTC CTCCTTCTCC GACCGCATCT CCACGCCGCC CTCCGACATG  GACCCGGGCC TCGCCACCGC GCTCAAGCAG CAGTGCCCGG CGAACCCCAA CTTCACCAAC GACCCCACGG TGGTGCAGGA CGTCGTCACC GCCGACAAGC TGGACAACCA GTACTACAAG  AACGTCCTGA ACCACAAGGT GCTCTTCAAC TCCGACGCGG CGCTTCTGAC GTCGACGCCG ACGGCGAGGA AGGTCGTGGA GAACGCGTTC GTCCGCGGGA GGTGGGAGAA GAAGTTCGCC 
AAGGCCATGG TGAAGATGGC CGCCATCGAG GTCAAGACCG CCGCCAACGG CGAGGTCAGG AAGAACTGCC GCGTCGTCAA CAGCAAGCCG 

Retrieve as FASTA