Entry information : SiPrx170 (Si039321m)
Entry ID 9513
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-15 (Qiang Li)
Peroxidase information: SiPrx170 (Si039321m)
Name (synonym) SiPrx170 (Si039321m)
Class Class III peroxidase    [Orthogroup: Prx123]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx170
start..stop
S start..stop
SiPrx172 561 0 1..322 1..322
OsPrx44 545 0 2..322 3..323
BdiPrx41 545 0 2..323 3..324
OsPrx42 509 0 21..322 22..323
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 45578002..45578991 990  
join(45578002..45578991)


exon

Literature and cross-references SiPrx170 (Si039321m)
DNA ref. Phytozome 12:   scaffold_9 (45578002..45578991)
Protein sequence: SiPrx170 (Si039321m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (307)
PWM (Da):   %s   35844.35 (33393.1) Transmb domain:   %s   i7-29o
PI (pH):   %s   9.14 (9.25) Peptide Signal:   %s   cut: 24 range:24-330
Sequence
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Send to Peroxiscan
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MAAAFRLVVV VTCALLLASA CQGLHVGYYK KTCPRVEHIV RAEVKKFVYK NAGIGAGLIR MLFHDCFVQG CDGSVLLDPT PANPEPEKRS PPNFPSLRGF EVIDAAKDAV ERACPGKVSC  ADIVAFAARD AAYFLSKLKV KIDMPAGRLD GRVSRASEAL DNLPPPFFNV SELVAAFAAK GLGAEDMVVL SGAHTVGRSH CSSFVADRLA APSDINAGFA NFLRRRCPAN PTPANDPTVN 
QDFVTPNALD SQYYKNVLGH KVLFASDAAL LGSPETAKMV RDNAYIPGWW EDRFKAAFVK MSRVEVKTGK QGEIRKNCRV VNHGHPHRHY * 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGCGG CATTCAGGCT CGTCGTGGTG GTGACATGCG CCTTGTTGCT GGCGTCGGCC TGCCAGGGCC TCCATGTGGG CTACTACAAG AAGACGTGCC CCCGCGTGGA GCACATCGTG  AGGGCCGAGG TGAAGAAGTT CGTCTACAAG AACGCCGGCA TCGGCGCCGG CCTCATCCGC ATGCTCTTCC ACGACTGCTT CGTCCAGGGA TGCGACGGCT CCGTCCTCCT GGACCCGACG  CCGGCGAACC CGGAGCCGGA GAAGCGGAGC CCGCCCAACT TCCCCAGCCT GCGCGGCTTC GAGGTGATCG ACGCGGCCAA GGACGCCGTC GAGAGGGCCT GCCCGGGCAA GGTCTCCTGC  GCCGACATCG TCGCCTTCGC CGCCCGCGAC GCCGCCTACT TCCTCAGCAA GCTCAAGGTA AAGATCGACA TGCCCGCCGG CCGCCTCGAC GGGCGCGTCT CCAGGGCCTC GGAGGCCCTC  GACAACCTGC CGCCCCCATT CTTCAACGTC AGCGAGCTCG TCGCCGCCTT CGCCGCCAAG GGTCTCGGCG CCGAGGACAT GGTCGTGCTC TCCGGCGCGC ACACCGTCGG CCGCTCCCAC  TGCTCGTCCT TCGTCGCCGA CCGCCTCGCC GCCCCCTCCG ACATCAACGC CGGGTTTGCC AACTTCCTCA GGAGGCGGTG CCCCGCCAAC CCGACCCCGG CGAACGACCC CACCGTGAAC  CAGGACTTCG TCACCCCCAA CGCGCTCGAC AGCCAGTACT ACAAGAACGT GCTCGGGCAC AAGGTGCTCT TCGCGTCCGA CGCCGCGCTG CTCGGCTCGC CGGAGACGGC CAAGATGGTG  CGCGACAACG CCTACATCCC CGGCTGGTGG GAGGACAGGT TCAAGGCCGC CTTCGTCAAG ATGTCCCGGG TGGAGGTGAA GACCGGCAAG CAGGGCGAGA TCAGGAAGAA TTGCAGGGTT 
GTCAACCATG GTCATCCGCA CAGACACTAC 

Retrieve as FASTA  
CDS
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ATGGCTGCGG CATTCAGGCT CGTCGTGGTG GTGACATGCG CCTTGTTGCT GGCGTCGGCC TGCCAGGGCC TCCATGTGGG CTACTACAAG AAGACGTGCC CCCGCGTGGA GCACATCGTG  AGGGCCGAGG TGAAGAAGTT CGTCTACAAG AACGCCGGCA TCGGCGCCGG CCTCATCCGC ATGCTCTTCC ACGACTGCTT CGTCCAGGGA TGCGACGGCT CCGTCCTCCT GGACCCGACG  CCGGCGAACC CGGAGCCGGA GAAGCGGAGC CCGCCCAACT TCCCCAGCCT GCGCGGCTTC GAGGTGATCG ACGCGGCCAA GGACGCCGTC GAGAGGGCCT GCCCGGGCAA GGTCTCCTGC  GCCGACATCG TCGCCTTCGC CGCCCGCGAC GCCGCCTACT TCCTCAGCAA GCTCAAGGTA AAGATCGACA TGCCCGCCGG CCGCCTCGAC GGGCGCGTCT CCAGGGCCTC GGAGGCCCTC  GACAACCTGC CGCCCCCATT CTTCAACGTC AGCGAGCTCG TCGCCGCCTT CGCCGCCAAG GGTCTCGGCG CCGAGGACAT GGTCGTGCTC TCCGGCGCGC ACACCGTCGG CCGCTCCCAC  TGCTCGTCCT TCGTCGCCGA CCGCCTCGCC GCCCCCTCCG ACATCAACGC CGGGTTTGCC AACTTCCTCA GGAGGCGGTG CCCCGCCAAC CCGACCCCGG CGAACGACCC CACCGTGAAC  CAGGACTTCG TCACCCCCAA CGCGCTCGAC AGCCAGTACT ACAAGAACGT GCTCGGGCAC AAGGTGCTCT TCGCGTCCGA CGCCGCGCTG CTCGGCTCGC CGGAGACGGC CAAGATGGTG  CGCGACAACG CCTACATCCC CGGCTGGTGG GAGGACAGGT TCAAGGCCGC CTTCGTCAAG ATGTCCCGGG TGGAGGTGAA GACCGGCAAG CAGGGCGAGA TCAGGAAGAA TTGCAGGGTT 
GTCAACCATG GTCATCCGCA CAGACACTAC 

Retrieve as FASTA