Entry information : SiPrx38 (Si007872m)
Entry ID 9536
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-12-14 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-12-07 (Qiang Li)
Peroxidase information: SiPrx38 (Si007872m)
Name (synonym) SiPrx38 (Si007872m)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx38
start..stop
S start..stop
ZmPrx71 461 2e-164 23..342 34..351
ZmPrx57 459 1e-163 14..338 5..339
SbPrx80 456 4e-162 28..341 39..351
BdiPrx113 455 6e-162 23..339 26..340
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 9528299..9529324 1026  
complement(join(9528299..9529324))


exon

Literature and cross-references SiPrx38 (Si007872m)
DNA ref. Phytozome 11:   scaffold_4 (9529324..9528299)
Protein sequence: SiPrx38 (Si007872m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   342 (316)
PWM (Da):   %s   36082.33 (33219.8)  
PI (pH):   %s   8.57 (8.91) Peptide Signal:   %s   cut: 27 range:27-342
Sequence
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Send to Peroxiscan
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MDTHRLHTSA LFLLLLVIDA AMVTEAKLVP NYYRKTCPRA ERIVTDVVSQ KQLSHPTTAA GVLRVFFHDC FVSGCDASVL VSPTAFARSE RDAAQSQSLP GDAFEAVARA KTALELACPG  VVSCADVLAI AARDLVTMTG GPFYPLRLGR KDALASSSAA PDAELPLANS TVPRLVAMFA AKGFTVQELV ALSGAHTLGF AHCAEFADRI FRRGNKGxxx xxxxxDPAMN PAYAKGLHDA 
CRNYQRDPTI AVFNDVMTPG KFDNMYFVNL QRGLGLLSTD QELWTDPRTR PFVQRYAANQ TAFFADFARA IVKLGVMGVK TGRDGEVRRR CDMFNGNPVP GG 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACACTC ACCGTTTGCA CACATCGGCG CTCTTCCTCC TCCTCCTCGT CATCGACGCG GCGATGGTGA CGGAGGCCAA GCTGGTGCCG AACTACTACA GAAAGACGTG CCCGCGCGCG  GAGCGGATCG TGACGGACGT GGTCTCCCAG AAGCAGCTCT CGCACCCGAC CACCGCGGCG GGTGTGCTCC GCGTCTTCTT CCACGACTGC TTCGTCAGCG GCTGCGACGC GTCCGTGCTG  GTGTCCCCGA CCGCGTTCGC CCGGTCCGAG CGCGACGCCG CGCAGAGCCA GTCGCTCCCG GGGGACGCCT TCGAGGCCGT GGCGCGCGCC AAGACGGCGC TCGAGCTCGC GTGCCCCGGC  GTCGTGTCCT GCGCCGACGT GCTCGCCATC GCGGCCCGGG ACCTCGTCAC CATGACCGGG GGCCCCTTCT ACCCGCTCCG CCTGGGACGC AAGGACGCGC TCGCCTCGTC CTCCGCCGCG  CCCGACGCCG AGCTCCCGCT CGCCAACTCC ACCGTGCCAC GCCTCGTCGC CATGTTCGCC GCCAAGGGGT TCACGGTGCA GGAGCTCGTC GCGCTCTCCG GCGCGCACAC GCTGGGGTTC  GCGCACTGCG CCGAGTTCGC CGACCGCATC TTCCGCCGGG GCAACAAGGG Tnnnnnnnnn nnnnnnnnnn nnnACGACCC GGCCATGAAC CCGGCGTACG CCAAGGGGCT GCATGACGCG  TGCAGGAACT ACCAGCGGGA CCCGACCATC GCGGTGTTCA ACGACGTCAT GACGCCGGGC AAGTTCGACA ACATGTACTT CGTCAACCTC CAACGCGGCC TGGGCCTGCT CAGCACGGAC  CAGGAGCTCT GGACCGATCC CCGGACGCGG CCATTCGTGC AGCGCTACGC CGCCAACCAG ACGGCCTTCT TCGCCGACTT CGCGCGCGCC ATCGTGAAGC TCGGCGTCAT GGGCGTCAAG 
ACGGGGCGGG ACGGGGAGGT GCGCCGGCGG TGCGACATGT TCAACGGAAA CCCCGTCCCG GGGGGC 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACACTC ACCGTTTGCA CACATCGGCG CTCTTCCTCC TCCTCCTCGT CATCGACGCG GCGATGGTGA CGGAGGCCAA GCTGGTGCCG AACTACTACA GAAAGACGTG CCCGCGCGCG  GAGCGGATCG TGACGGACGT GGTCTCCCAG AAGCAGCTCT CGCACCCGAC CACCGCGGCG GGTGTGCTCC GCGTCTTCTT CCACGACTGC TTCGTCAGCG GCTGCGACGC GTCCGTGCTG  GTGTCCCCGA CCGCGTTCGC CCGGTCCGAG CGCGACGCCG CGCAGAGCCA GTCGCTCCCG GGGGACGCCT TCGAGGCCGT GGCGCGCGCC AAGACGGCGC TCGAGCTCGC GTGCCCCGGC  GTCGTGTCCT GCGCCGACGT GCTCGCCATC GCGGCCCGGG ACCTCGTCAC CATGACCGGG GGCCCCTTCT ACCCGCTCCG CCTGGGACGC AAGGACGCGC TCGCCTCGTC CTCCGCCGCG  CCCGACGCCG AGCTCCCGCT CGCCAACTCC ACCGTGCCAC GCCTCGTCGC CATGTTCGCC GCCAAGGGGT TCACGGTGCA GGAGCTCGTC GCGCTCTCCG GCGCGCACAC GCTGGGGTTC  GCGCACTGCG CCGAGTTCGC CGACCGCATC TTCCGCCGGG GCAACAAGGG Tnnnnnnnnn nnnnnnnnnn nnnACGACCC GGCCATGAAC CCGGCGTACG CCAAGGGGCT GCATGACGCG  TGCAGGAACT ACCAGCGGGA CCCGACCATC GCGGTGTTCA ACGACGTCAT GACGCCGGGC AAGTTCGACA ACATGTACTT CGTCAACCTC CAACGCGGCC TGGGCCTGCT CAGCACGGAC  CAGGAGCTCT GGACCGATCC CCGGACGCGG CCATTCGTGC AGCGCTACGC CGCCAACCAG ACGGCCTTCT TCGCCGACTT CGCGCGCGCC ATCGTGAAGC TCGGCGTCAT GGGCGTCAAG 
ACGGGGCGGG ACGGGGAGGT GCGCCGGCGG TGCGACATGT TCAACGGAAA CCCCGTCCCG GGGGGC 

Retrieve as FASTA