Entry information : SiPrx58 (Si011748m)
Entry ID 9553
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-15 (Qiang Li)
Peroxidase information: SiPrx58 (Si011748m)
Name (synonym) SiPrx58 (Si011748m)
Class Class III peroxidase    [Orthogroup: Prx019]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx58
start..stop
S start..stop
SbPrx89 466 3e-167 27..329 1..309
OsPrx52 412 2e-145 36..330 35..331
MguPrx50 280 8e-94 19..329 6..321
EguPrx48 276 6e-92 35..329 22..318
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1168549..1169538 990  
join(1168549..1169538)


exon

Literature and cross-references SiPrx58 (Si011748m)
DNA ref. Phytozome 12:   scaffold_7 (1168549..1169538)
Protein sequence: SiPrx58 (Si011748m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330 (296)
PWM (Da):   %s   35287.49 (31595.4)  
PI (pH):   %s   5.15 (4.77) Peptide Signal:   %s   cut: 35 range:35-330
Sequence
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Send to Peroxiscan
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MGHLHRFRLV DDLPGLLRLL LLLVLAMAAA TSNALDAGYY AATCPDAEAI VSNAMSRLHY NDPTLAPALI RLLFHDCFVR GCDASVLISP TPRYSSERAA IPNHTLRGFP AVDAVKRALE  AACPGAVSCA DALALMARDA VSLLGGARYG VALGRRDGTQ SNPWEVDLPA PFARLDDVLA YFAARGFSAE EAVVLLGGGH TVGGAHCGSF RYRLTQPDGT MDEQVRCEML DACGAADLPL 
DTDPATFLDP DTPFAVDNNY YAQLMVNRTL LQVDQEAATH HATAHHVAYY AASNDAFLQR FAEAMEKLSN VGVLEGDAGE VRKVCSRYNT 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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ATGGGCCATC TTCATCGGTT CCGGCTAGTC GACGATCTGC CGGGCCTCCT CCGCCTGCTG CTGCTGCTGG TGCTGGCAAT GGCGGCGGCA ACCAGCAACG CTCTGGACGC GGGGTACTAC  GCGGCGACGT GCCCGGACGC GGAGGCGATA GTTTCGAACG CCATGTCGCG GCTGCACTAC AACGACCCGA CCCTGGCGCC GGCCCTCATC CGCCTCCTCT TCCACGACTG CTTCGTCCGC  GGCTGCGACG CCTCCGTCCT CATCTCCCCC ACGCCGCGCT ACTCCTCCGA GCGCGCCGCC ATCCCCAACC ACACCCTCCG CGGCTTCCCC GCCGTCGACG CCGTCAAGCG CGCGCTCGAG  GCTGCCTGCC CGGGCGCCGT CTCCTGCGCC GACGCGCTCG CGCTCATGGC CCGGGACGCG GTGTCCCTCC TCGGCGGCGC CCGCTACGGC GTCGCGCTGG GGCGGCGCGA CGGCACGCAG  TCCAATCCGT GGGAGGTCGA CCTCCCTGCG CCCTTCGCCA GGCTCGACGA CGTGCTCGCC TACTTCGCCG CCAGGGGGTT CTCCGCCGAG GAGGCCGTCG TGCTCCTCGG CGGCGGCCAC  ACCGTCGGCG GCGCGCACTG CGGCTCCTTC CGCTACCGCC TCACCCAGCC CGACGGCACC ATGGATGAGC AGGTCCGCTG CGAAATGCTT GACGCCTGCG GCGCCGCCGA CCTGCCGCTC  GACACCGACC CCGCCACGTT CCTCGACCCG GACACGCCGT TCGCCGTCGA CAACAACTAC TACGCGCAGC TCATGGTCAA CAGGACGCTG CTGCAGGTCG ACCAGGAGGC CGCCACGCAC  CACGCCACCG CGCACCACGT CGCGTACTAC GCCGCCAGCA ACGACGCGTT CCTGCAGAGG TTCGCCGAGG CCATGGAAAA GCTCAGCAAC GTCGGCGTGC TCGAGGGAGA CGCCGGAGAG 
GTCAGGAAGG TCTGCTCTAG GTACAACACT 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGCCATC TTCATCGGTT CCGGCTAGTC GACGATCTGC CGGGCCTCCT CCGCCTGCTG CTGCTGCTGG TGCTGGCAAT GGCGGCGGCA ACCAGCAACG CTCTGGACGC GGGGTACTAC  GCGGCGACGT GCCCGGACGC GGAGGCGATA GTTTCGAACG CCATGTCGCG GCTGCACTAC AACGACCCGA CCCTGGCGCC GGCCCTCATC CGCCTCCTCT TCCACGACTG CTTCGTCCGC  GGCTGCGACG CCTCCGTCCT CATCTCCCCC ACGCCGCGCT ACTCCTCCGA GCGCGCCGCC ATCCCCAACC ACACCCTCCG CGGCTTCCCC GCCGTCGACG CCGTCAAGCG CGCGCTCGAG  GCTGCCTGCC CGGGCGCCGT CTCCTGCGCC GACGCGCTCG CGCTCATGGC CCGGGACGCG GTGTCCCTCC TCGGCGGCGC CCGCTACGGC GTCGCGCTGG GGCGGCGCGA CGGCACGCAG  TCCAATCCGT GGGAGGTCGA CCTCCCTGCG CCCTTCGCCA GGCTCGACGA CGTGCTCGCC TACTTCGCCG CCAGGGGGTT CTCCGCCGAG GAGGCCGTCG TGCTCCTCGG CGGCGGCCAC  ACCGTCGGCG GCGCGCACTG CGGCTCCTTC CGCTACCGCC TCACCCAGCC CGACGGCACC ATGGATGAGC AGGTCCGCTG CGAAATGCTT GACGCCTGCG GCGCCGCCGA CCTGCCGCTC  GACACCGACC CCGCCACGTT CCTCGACCCG GACACGCCGT TCGCCGTCGA CAACAACTAC TACGCGCAGC TCATGGTCAA CAGGACGCTG CTGCAGGTCG ACCAGGAGGC CGCCACGCAC  CACGCCACCG CGCACCACGT CGCGTACTAC GCCGCCAGCA ACGACGCGTT CCTGCAGAGG TTCGCCGAGG CCATGGAAAA GCTCAGCAAC GTCGGCGTGC TCGAGGGAGA CGCCGGAGAG 
GTCAGGAAGG TCTGCTCTAG GTACAACACT 

Retrieve as FASTA