Entry information : SiPrx84 ( Si020698m)
Entry ID 9575
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-12-07 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-15 (Christophe Dunand)
Peroxidase information: SiPrx84 ( Si020698m)
Name (synonym) SiPrx84 ( Si020698m)
Class Class III peroxidase    [Orthogroup: Prx155]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx84
start..stop
S start..stop
ZmPrx89 498 2e-179 31..332 32..337
SbPrx28 476 8e-171 31..332 36..338
OsPrx96 468 2e-167 32..332 28..328
BdiPrx36 424 3e-150 33..332 34..333
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 97016..98011 996  
complement(join(97016..98011))


exon

Literature and cross-references SiPrx84 ( Si020698m)
DNA ref. Phytozome 12:   scaffold_11 (98011..97016)
Protein sequence: SiPrx84 ( Si020698m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332 (301)
PWM (Da):   %s   35513.5 (32141.8) Transmb domain:   %s   i12-31o
PI (pH):   %s   4.83 (4.71) Peptide Signal:   %s   cut: 32 range:32-332
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASQLMFRGS RFLLLVLVVA SSTLMMDTTT AQLQYDFYNT TCPGVEDLVR AELLALFAAD VTLPAGLLRL HFHDCFGAGC DAALLLKSHN GTAQRDADPN STVRGYEAIE AVKAKVEEAC  PLVVSCADIM AMAARDAVNY TQGPAYAVET GRRDGNVSRK EDALRFLPPA DGNVTVLTQY FAAQNLSYKD MVVLSAAHSI GVAHCPSFSN RLYNYTGAGD QDPSLDADYA KNLTAKCKPG 
NVATVQPLDP TTPSTFDLGY YNNVYNHRAL LASDAALLND SLSGAYVQLM TNASSVDVFF ADFAVSMINM GRIGVRTGTD GEIRATCAIY VD 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCCC AGCTGATGTT CCGTGGCAGC AGGTTCTTGT TGTTGGTGCT CGTCGTGGCG TCGTCGACCC TGATGATGGA CACAACAACG GCGCAGCTGC AGTACGATTT CTACAACACG  ACGTGCCCGG GCGTGGAGGA CCTGGTGCGC GCCGAGCTGC TGGCCCTGTT CGCCGCCGAC GTCACGCTCC CGGCGGGTCT CCTCCGGCTG CACTTCCACG ACTGCTTCGG CGCCGGCTGC  GACGCCGCGC TCCTGCTAAA GTCGCACAAC GGCACGGCCC AGCGCGACGC CGACCCCAAC TCCACGGTGC GCGGCTACGA GGCCATCGAG GCCGTCAAGG CCAAGGTCGA GGAGGCCTGC  CCGCTCGTCG TCTCCTGCGC CGACATCATG GCGATGGCGG CGCGAGACGC GGTCAACTAC ACCCAGGGCC CTGCGTACGC GGTGGAGACC GGGCGGCGCG ACGGCAACGT CTCCCGCAAG  GAGGACGCCC TGCGCTTCCT GCCTCCCGCC GACGGCAACG TCACCGTCCT CACCCAGTAC TTTGCCGCCC AGAACCTCAG CTACAAGGAC ATGGTCGTCC TCTCCGCCGC CCACTCCATC  GGTGTCGCGC ACTGCCCCTC CTTCTCCAAC CGCCTCTACA ACTACACCGG CGCCGGCGAC CAGGACCCAT CGCTCGACGC CGACTACGCC AAGAACCTCA CGGCGAAGTG CAAGCCGGGC  AACGTCGCCA CCGTGCAACC GCTCGACCCC ACGACGCCCA GCACCTTCGA CCTGGGGTAC TACAACAACG TCTACAACCA CCGGGCGCTG CTCGCCTCCG ACGCCGCGCT GCTCAACGAC  AGCCTCTCCG GCGCCTACGT CCAACTCATG ACCAACGCCT CCTCCGTCGA CGTCTTCTTC GCCGACTTCG CCGTCTCCAT GATCAACATG GGAAGGATCG GAGTGCGCAC CGGCACCGAC 
GGCGAGATCA GGGCCACATG CGCAATCTAC GTCGAC 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCCC AGCTGATGTT CCGTGGCAGC AGGTTCTTGT TGTTGGTGCT CGTCGTGGCG TCGTCGACCC TGATGATGGA CACAACAACG GCGCAGCTGC AGTACGATTT CTACAACACG  ACGTGCCCGG GCGTGGAGGA CCTGGTGCGC GCCGAGCTGC TGGCCCTGTT CGCCGCCGAC GTCACGCTCC CGGCGGGTCT CCTCCGGCTG CACTTCCACG ACTGCTTCGG CGCCGGCTGC  GACGCCGCGC TCCTGCTAAA GTCGCACAAC GGCACGGCCC AGCGCGACGC CGACCCCAAC TCCACGGTGC GCGGCTACGA GGCCATCGAG GCCGTCAAGG CCAAGGTCGA GGAGGCCTGC  CCGCTCGTCG TCTCCTGCGC CGACATCATG GCGATGGCGG CGCGAGACGC GGTCAACTAC ACCCAGGGCC CTGCGTACGC GGTGGAGACC GGGCGGCGCG ACGGCAACGT CTCCCGCAAG  GAGGACGCCC TGCGCTTCCT GCCTCCCGCC GACGGCAACG TCACCGTCCT CACCCAGTAC TTTGCCGCCC AGAACCTCAG CTACAAGGAC ATGGTCGTCC TCTCCGCCGC CCACTCCATC  GGTGTCGCGC ACTGCCCCTC CTTCTCCAAC CGCCTCTACA ACTACACCGG CGCCGGCGAC CAGGACCCAT CGCTCGACGC CGACTACGCC AAGAACCTCA CGGCGAAGTG CAAGCCGGGC  AACGTCGCCA CCGTGCAACC GCTCGACCCC ACGACGCCCA GCACCTTCGA CCTGGGGTAC TACAACAACG TCTACAACCA CCGGGCGCTG CTCGCCTCCG ACGCCGCGCT GCTCAACGAC  AGCCTCTCCG GCGCCTACGT CCAACTCATG ACCAACGCCT CCTCCGTCGA CGTCTTCTTC GCCGACTTCG CCGTCTCCAT GATCAACATG GGAAGGATCG GAGTGCGCAC CGGCACCGAC 
GGCGAGATCA GGGCCACATG CGCAATCTAC GTCGAC 

Retrieve as FASTA