Entry information : GmAPx[P]14
Entry ID 9670
Creation 2011-10-06 (Qiang Li (Scipio))
Last sequence changes 2011-12-14 (Qiang Li (Scipio))
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2011-12-02 (Qiang Li)
Peroxidase information: GmAPx[P]14
Name GmAPx[P]14
Class Ascorbate peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmAPx[P]14
start..stop
S start..stop
GmAPx[P]11 132 2e-42 1..74 1..74
GmAPx[P]15 89 2e-25 20..74 1..55
GmAPx[P]16 75 8e-20 1..34 19..52
GmAPx[P]19 75 9e-20 1..34 19..52
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 32463186..32463235 50 N° 2 32463340..32463511 172  
join(32463186..32463235,32463340..32463511)


exon

Literature and cross-references GmAPx[P]14
DNA ref. Phytozome 12:   Gm02 (32463186..32463511)
Protein sequence: GmAPx[P]14
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   73
PWM (Da):   %s   7956.84  
PI (pH):   %s   6.21
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
RGFIAEKRCAPLMLCLAWHSAGTFDKGTNTGGPFEHCY*DFGATQDGVPYFELHRFLPGDVFFVFGVFALNAV

Retrieve as FASTA  
Remarks Pseudogene from genomic. Just short 5' end with stop in it. No prediction from phytozome.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AGAGGCTTCATCGCTGAGAAGAGATGCGCTCCTCTAATGCTCTGTTTGGCGTGCGTTCTTTTTTTAATTTTTTTATTTAACTTTAGATCGCTGTTATTTACGATTGAGTTTATGGATTAT
TGTTTTGACGCGTTTTGGTGTGTTTCGTGTGCAGATGGCACTCTGCTGGAACCTTTGACAAGGGCACAAACACTGGTGGACCCTTCGAACATTGCTATTAGGATTTTGGAGCCACTCAAG
ACGGAGTTCCCTATTTTGAGCTACACCGATTTCTACCTGGTGACGTATTTTTTGTCTTTGGTGTTTTTGCGCTTAATGCTGTGTTT

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AGAGGCTTCATCGCTGAGAAGAGATGCGCTCCTCTAATGCTCTGTTTGGCATGGCACTCTGCTGGAACCTTTGACAAGGGCACAAACACTGGTGGACCCTTCGAACATTGCTATTAGGAT
TTTGGAGCCACTCAAGACGGAGTTCCCTATTTTGAGCTACACCGATTTCTACCTGGTGACGTATTTTTTGTCTTTGGTGTTTTTGCGCTTAATGCTGTGTTT

Retrieve as FASTA