Entry information : TsPrx31 (Thhalv10004596m)
Entry ID 9756
Creation 2011-11-18 (Qiang Li)
Last sequence changes 2011-11-18 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-11-12 (Christophe Dunand)
Peroxidase information: TsPrx31 (Thhalv10004596m)
Name (synonym) TsPrx31 (Thhalv10004596m)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Eutrema
Organism Thellungiella salsuginea (Eutrema salsugineum)    [TaxId: 72664 ]
Cellular localisation N/D
Tissue type Leaves
Inducer Cold stress
Repressor N/D
Best BLASTp hits
Perox score E-value TsPrx31
start..stop
S start..stop
ThPrx31 661 0 1..323 1..323
BstrPrx60 578 0 23..323 16..316
AtPrx31 573 0 23..323 16..316
AlyPrx31 572 0 23..323 16..316
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 5704731..5705702 972  
complement(join(5704731..5705702))


exon

Literature and cross-references TsPrx31 (Thhalv10004596m)
Literature Wong,C.E., Li,Y., Whitty,B.R., Diaz-Camino,C., Akhter,S.R., Brandle ,J.E., Golding,G.B., Weretilnyk,E.A., Moffatt,B.A. and Griffith,M. Expressed sequence tags from the Yukon ecotype of Thellungiella reveal that gene expression in response to cold, drought and salinity shows little overlap. Plant Mol. Biol. 58 (4), 561-574 (2005)
DNA ref. Phytozome 11:   scaffold_6 (5705702..5704731)
EST ref. GenBank:   DN773596.1
Protein sequence: TsPrx31 (Thhalv10004596m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (297)
PWM (Da):   %s   35770.08 (32864.5)  
PI (pH):   %s   8.55 (8.72) Peptide Signal:   %s   cut: 27 range:27-323
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAEQSPLKSL SLLLFFLTLL ASTAESRLST DFYSKSCPRF LDIVRDTITN KQITNPTTAA AVIRLFFHDC FPNGCDASVL VSSTAFNSAE RDSSINLSLP GDGFDVITRA KTALELACPN  TVSCSDIISV ATRDLLVTVG GPYYSVFLGR RDSRTSKSSL VDDLLPVPSS PISKLIHQFE SRGFSVQEMV ALSGAHSIGF SHCKEFAGRV ARNNTGYNPR FADALRKACA NYPKDPTISV 
FNDIMTPNKF DNMYFQNIPK GLGVLESDHG LYSDPRTRPF VDLYARDQDR FFKDFARAMQ KLSLYGVQTG RRGEIRRRCD AIN* 

Retrieve as FASTA  
Remarks Complete sequence fromm genomic and 1 EST.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGAAC AATCGCCACT CAAATCTCTC TCCCTCCTCC TCTTCTTCCT CACTCTACTC GCCTCCACCG CAGAATCTCG CCTATCCACC GATTTCTACT CAAAATCATG CCCTAGATTC  CTCGACATAG TCCGCGACAC AATCACAAAC AAACAAATCA CGAACCCAAC CACCGCAGCC GCCGTAATCC GCCTCTTCTT CCACGACTGT TTCCCCAACG GCTGCGACGC CTCCGTCCTC  GTCTCCTCCA CCGCCTTCAA CTCCGCCGAA CGCGACTCCT CAATCAACCT CTCCCTCCCC GGCGACGGAT TCGACGTCAT CACCAGAGCC AAAACCGCTC TCGAGCTCGC TTGCCCAAAC  ACCGTCTCTT GCTCCGACAT CATCTCCGTC GCGACTCGCG ACCTCCTCGT CACCGTCGGT GGTCCTTACT ACTCCGTCTT CCTCGGCCGC CGCGACTCGC GAACCTCGAA ATCGTCTCTC  GTCGACGATC TCCTCCCTGT TCCGTCTTCT CCGATCTCGA AGCTCATTCA CCAGTTCGAA TCCAGAGGAT TCTCCGTTCA GGAAATGGTC GCTCTCAGTG GGGCCCATTC CATTGGATTC  TCGCATTGCA AAGAGTTTGC GGGTCGGGTC GCCCGTAATA ACACCGGGTA TAACCCGAGA TTCGCGGACG CGTTGAGGAA AGCTTGTGCG AATTACCCGA AAGACCCGAC GATATCTGTC  TTCAACGATA TCATGACTCC GAACAAATTC GACAATATGT ATTTCCAGAA TATCCCCAAA GGTCTCGGGG TACTCGAGTC GGATCACGGG TTATACTCCG ACCCGAGAAC CCGGCCTTTT  GTTGATCTTT ACGCTAGAGA TCAAGATCGA TTCTTTAAAG ATTTCGCTAG AGCTATGCAG AAGCTGAGCC TTTACGGTGT ACAGACTGGC CGACGGGGAG AGATACGGCG AAGGTGCGAT 
GCGATTAACT GA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGAAC AATCGCCACT CAAATCTCTC TCCCTCCTCC TCTTCTTCCT CACTCTACTC GCCTCCACCG CAGAATCTCG CCTATCCACC GATTTCTACT CAAAATCATG CCCTAGATTC  CTCGACATAG TCCGCGACAC AATCACAAAC AAACAAATCA CGAACCCAAC CACCGCAGCC GCCGTAATCC GCCTCTTCTT CCACGACTGT TTCCCCAACG GCTGCGACGC CTCCGTCCTC  GTCTCCTCCA CCGCCTTCAA CTCCGCCGAA CGCGACTCCT CAATCAACCT CTCCCTCCCC GGCGACGGAT TCGACGTCAT CACCAGAGCC AAAACCGCTC TCGAGCTCGC TTGCCCAAAC  ACCGTCTCTT GCTCCGACAT CATCTCCGTC GCGACTCGCG ACCTCCTCGT CACCGTCGGT GGTCCTTACT ACTCCGTCTT CCTCGGCCGC CGCGACTCGC GAACCTCGAA ATCGTCTCTC  GTCGACGATC TCCTCCCTGT TCCGTCTTCT CCGATCTCGA AGCTCATTCA CCAGTTCGAA TCCAGAGGAT TCTCCGTTCA GGAAATGGTC GCTCTCAGTG GGGCCCATTC CATTGGATTC  TCGCATTGCA AAGAGTTTGC GGGTCGGGTC GCCCGTAATA ACACCGGGTA TAACCCGAGA TTCGCGGACG CGTTGAGGAA AGCTTGTGCG AATTACCCGA AAGACCCGAC GATATCTGTC  TTCAACGATA TCATGACTCC GAACAAATTC GACAATATGT ATTTCCAGAA TATCCCCAAA GGTCTCGGGG TACTCGAGTC GGATCACGGG TTATACTCCG ACCCGAGAAC CCGGCCTTTT  GTTGATCTTT ACGCTAGAGA TCAAGATCGA TTCTTTAAAG ATTTCGCTAG AGCTATGCAG AAGCTGAGCC TTTACGGTGT ACAGACTGGC CGACGGGGAG AGATACGGCG AAGGTGCGAT 
GCGATTAACT GA 

Retrieve as FASTA