Entry information : PcarDyPrx
Entry ID 9816
Creation 2011-11-21 (Christophe Dunand)
Last sequence changes 2011-12-09 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-06 (Catherine Mathe (Scipio))
Peroxidase information: PcarDyPrx
Name PcarDyPrx
Class DyP-type peroxidase D    [Orthogroup: DyPrxD001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phanerochaete
Organism Phanerochaete carnosa    [TaxId: 231932 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PcarDyPrx
start..stop
S start..stop
BaDyPrx08 733 0 1..561 12..570
BaDyPrx10 725 0 1..561 1..560
CcinDyPrx02 571 0 11..561 74..648
GluxDyPrx10 362 2e-119 94..557 69..520
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 994549..994701 153 N° 2 994755..994790 36 N° 3 994844..994884 41 N° 4 994931..995005 75
N° 5 995067..995896 830 N° 6 995954..996134 181 N° 7 996192..996328 137 N° 8 996384..996664 281
join(994549..994701,994755..994790,994844..994884,994931..995005,995067..995896, 995954..996134,996192..996328,996384..996664)


exon

Literature and cross-references PcarDyPrx
DNA ref. JGI genome:   scaffold_2 (994549..996664)
Protein sequence: PcarDyPrx
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   577
PWM (Da):   %s   64671.36  
PI (pH):   %s   5.47
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLNLQNREPQIFMREQKETVTLTIRFHHARDMTTKGEALLATTVDRTDTVKLPSDKDDVVKYLIKVFDQAGSTRPDQETTVEFVRKVDLDPLGLGNIQGDVIPGLPKALEFFYYFQITNVDGFRTAFKDFVLPKIVTSASLVQNPPPSPRDNRDHPFRGLAIGFSSLGIRKFRLNPTELGDRAFARGQMADSQALGDAGAEREGFWSPNWDSEYKANIDGIFLITAYNESNARKFIDELEEAFRWAPNRSSLRKIVALYGHPRPEPEAINDPFGWRGGGFTNPQVEGVTFSEEKPMAYTGTPVIPLGVLVMGREGDEDKDRRPEWAKDGSLIATRKLNCLVPELESYLLEEGQKIFPNLSSADAAAKLGARLMGRWKGTPVVLSPDNDAPEIAGDPARVNNFEFDKTDTNQKRCPFAAHMRKSNPRNDIDPNELKKHLIRRHNMPYGPEVSDEERENGTSEDRGLHLCAYQSSIERGFRYIQEWYNNVNFPPGKPTTPGWDPIFGQTGQEDEGVYRQMSGVNPAQPKQVTSFMEKFVDPRGGEYFFVPSMATLRQHIAAADPVFTAISCQVAAQG

Retrieve as FASTA  
Remarks Complete sequence from genomic (8 introns).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTCAATCTCCAGAACCGCGAACCACAGATATTTATGCGGGAGCAGAAGGAGACGGTCACGCTCACCATCAGATTTCACCATGCCAGAGACATGACCACGAAAGGGGAAGCGCTTCTC
GCCACGACGGTAGACAGGACCGATACGGTTAAG
GTGATACTCTATCAGATTTCAACAGGTAAAAGGGCTCATTCATTCGTTTCAAGCTACCCTCAGATAAGGATGATGTGGTTAAATATC
TT
GTATGCGCGGCTCGTGTTTGCTGCCGAGTTGCTAATATTGACATCCGCGCTAGATCAAGGTTTTTGATCAAGCTGGGAGCACTAGGCCTGACCAGTGGGTTCTTCCTTTGTCTGAATA
ACAGTCTGCTCACATTTGTCAGGGAAACGACGGTTGAATTTGTCCGGAAGGTCGATCTCGATCCTCTGGGACTCGGCAACATTCAGGGAGATGTGATGTGCGTGCCGTGCCGTCCACACC
AGCCCCAGCTATTCGCGGCTTACTTGGCGTTGTCTCAGACCTGGACTTCCCAAGGCTCTGGAATTTTTCTACTACTTCCAGATCACCAATGTTGACGGATTCCGCACGGCGTTCAAGGAT
TTTGTCTTGCCTAAGATTGTCACATCCGCAAGCCTTGTACAGAACCCACCGCCTTCTCCACGGGATAACCGAGACCACCCTTTCCGCGGTCTTGCTATCGGTTTCTCAAGCTTAGGTATC
AGAAAGTTCCGCCTCAACCCTACCGAGCTCGGAGACCGCGCGTTCGCACGGGGGCAGATGGCGGACTCGCAGGCGCTCGGGGACGCGGGTGCCGAGCGGGAGGGGTTCTGGTCGCCGAAC
TGGGACTCGGAATACAAGGCGAACATCGACGGTATCTTCCTCATCACAGCGTACAACGAGAGTAACGCGCGCAAGTTCATCGACGAGCTCGAGGAGGCCTTCCGCTGGGCGCCGAACCGG
TCGTCTTTGCGCAAGATCGTCGCGCTCTATGGGCATCCGCGCCCCGAACCTGAGGCTATAAATGATCCGTTCGGTTGGCGCGGGGGCGGCTTCACGAATCCACAGGTCGAGGGCGTCACG
TTCAGCGAGGAGAAACCGATGGCGTACACCGGCACGCCCGTGATCCCGCTCGGGGTACTCGTCATGGGGCGCGAAGGCGACGAGGACAAGGACAGGCGCCCCGAATGGGCCAAGGATGGT
AGTTTGATTGCGACGCGGAAGCTCAACTGTCTCGTCCCCGAGCTCGAAAGTTATCTGCTCGAGGAGGGTCAGAAGATCTTCCCGAACCTGAGCAGTGCCGACGCAGCCGCCAAACTCGGC
GCAAGGCTCATGGGCCGATGGAAGAACG
GTGTGCAACAGCCTTTGTATCTGTCTACTGCTCGCTCGTATTGACGACGTTCCCCAGGGACACCTGTCGTACTGTCTCCGGACAACGACGCG
CCCGAGATCGCGGGGGACCCTGCGCGGGTGAACAACTTCGAGTTCGACAAGACCGATACGAATCAGAAACGGTGTCCGTTCGCAGCGCACATGCGCAAGTCGAACCCGCGCAACGATATC
GACCCTAACGAGCTGAAGAAGCATCT
GTGAGTGGCCGCTGGCTTGATTGGCGATTTGTCTTCTGACATGCCGTGTCATCGTAGCATCCGGAGGCATAACATGCCATACGGGCCCGAGGTC
AGCGACGAGGAGCGCGAAAACGGTACGAGCGAAGACCGGGGTCTGCACCTCTGCGCGTACCAGAGCAGCATCGAACGGGGCTTCCGCTACATCCAATGCG
GTAGGCACTCCTCTGCGCGT
TGCTGCACACACACTGACCCAGAGCCCACGCGTAGAGTGGTACAATAATGTTAACTTCCCTCCCGGGAAGCCAACGACGCCCGGCTGGGACCCAATTTTCGGGCAGACGGGGCAAGAGGA
CGAGGGCGTCTACCGACAGATGAGCGGCGTCAATCCTGCGCAGCCTAAGCAAGTGACGAGCTTCATGGAGAAGTTTGTCGATCCGCGGGGAGGGGAGTACTTCTTTGTGCCATCCATGGC
CACCTTGCGACAGCACATTGCGGCAGCGGATCCGGTTTTTACAGCGATCTCTTGTCAAGTGGCGGCCCAAGGCTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTCAATCTCCAGAACCGCGAACCACAGATATTTATGCGGGAGCAGAAGGAGACGGTCACGCTCACCATCAGATTTCACCATGCCAGAGACATGACCACGAAAGGGGAAGCGCTTCTC
GCCACGACGGTAGACAGGACCGATACGGTTAAG
CTACCCTCAGATAAGGATGATGTGGTTAAATATCTTATCAAGGTTTTTGATCAAGCTGGGAGCACTAGGCCTGACCAGGAAACGACG
GTTGAATTTGTCCGGAAGGTCGATCTCGATCCTCTGGGACTCGGCAACATTCAGGGAGATGTGAT
ACCTGGACTTCCCAAGGCTCTGGAATTTTTCTACTACTTCCAGATCACCAATGTT
GACGGATTCCGCACGGCGTTCAAGGATTTTGTCTTGCCTAAGATTGTCACATCCGCAAGCCTTGTACAGAACCCACCGCCTTCTCCACGGGATAACCGAGACCACCCTTTCCGCGGTCTT
GCTATCGGTTTCTCAAGCTTAGGTATCAGAAAGTTCCGCCTCAACCCTACCGAGCTCGGAGACCGCGCGTTCGCACGGGGGCAGATGGCGGACTCGCAGGCGCTCGGGGACGCGGGTGCC
GAGCGGGAGGGGTTCTGGTCGCCGAACTGGGACTCGGAATACAAGGCGAACATCGACGGTATCTTCCTCATCACAGCGTACAACGAGAGTAACGCGCGCAAGTTCATCGACGAGCTCGAG
GAGGCCTTCCGCTGGGCGCCGAACCGGTCGTCTTTGCGCAAGATCGTCGCGCTCTATGGGCATCCGCGCCCCGAACCTGAGGCTATAAATGATCCGTTCGGTTGGCGCGGGGGCGGCTTC
ACGAATCCACAGGTCGAGGGCGTCACGTTCAGCGAGGAGAAACCGATGGCGTACACCGGCACGCCCGTGATCCCGCTCGGGGTACTCGTCATGGGGCGCGAAGGCGACGAGGACAAGGAC
AGGCGCCCCGAATGGGCCAAGGATGGTAGTTTGATTGCGACGCGGAAGCTCAACTGTCTCGTCCCCGAGCTCGAAAGTTATCTGCTCGAGGAGGGTCAGAAGATCTTCCCGAACCTGAGC
AGTGCCGACGCAGCCGCCAAACTCGGCGCAAGGCTCATGGGCCGATGGAAGAACG
GGACACCTGTCGTACTGTCTCCGGACAACGACGCGCCCGAGATCGCGGGGGACCCTGCGCGGGTG
AACAACTTCGAGTTCGACAAGACCGATACGAATCAGAAACGGTGTCCGTTCGCAGCGCACATGCGCAAGTCGAACCCGCGCAACGATATCGACCCTAACGAGCTGAAGAAGCATCT
CATC
CGGAGGCATAACATGCCATACGGGCCCGAGGTCAGCGACGAGGAGCGCGAAAACGGTACGAGCGAAGACCGGGGTCTGCACCTCTGCGCGTACCAGAGCAGCATCGAACGGGGCTTCCGC
TACATCCAATGCG
AGTGGTACAATAATGTTAACTTCCCTCCCGGGAAGCCAACGACGCCCGGCTGGGACCCAATTTTCGGGCAGACGGGGCAAGAGGACGAGGGCGTCTACCGACAGATG
AGCGGCGTCAATCCTGCGCAGCCTAAGCAAGTGACGAGCTTCATGGAGAAGTTTGTCGATCCGCGGGGAGGGGAGTACTTCTTTGTGCCATCCATGGCCACCTTGCGACAGCACATTGCG
GCAGCGGATCCGGTTTTTACAGCGATCTCTTGTCAAGTGGCGGCCCAAGGCTAA

Retrieve as FASTA