Entry information : SbRboh05 (Sobic.003G347500.1[2.1] / Sb03g039050[1.4])
Entry ID 982
Creation 2008-11-18 (Christophe Dunand)
Last sequence changes 2015-04-28 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2015-04-28 (Christophe Dunand)
Peroxidase information: SbRboh05 (Sobic.003G347500.1[2.1] / Sb03g039050[1.4])
Name (synonym) SbRboh05 (Sobic.003G347500.1[2.1] / Sb03g039050[1.4])
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum
Organism Sorghum bicolor    [TaxId: 4558 ]
Cellular localisation N/D
Tissue type Leaves
Inducers Colletotrichum inoculation
Pathogen interaction
Repressor N/D
Best BLASTp hits
Perox score E-value SbRboh05
start..stop
S start..stop
ZmRboh03 1660 0 1..854 1..852
OsRboh03 1476 0 50..854 37..843
OsRboh04 1353 0 29..854 8..819
ZmRboh09 1350 0 40..854 20..822
Literature and cross-references SbRboh05 (Sobic.003G347500.1[2.1] / Sb03g039050[1.4])
Literature Klein,R.R. et al., unpublished
DNA ref. GenBank:   ED494597 [Fragment] JGI genome:   chr03 (66824795..66827403) [5' end]   scaffold_621 (70..1471) [3' end]
EST ref. GenBank:   BE366484 [3' end]   BE594456 [Fragment]
Protein sequence: SbRboh05 (Sobic.003G347500.1[2.1] / Sb03g039050[1.4])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   854
PWM (Da):   %s   96364.62 Transmb domain:   %s   o304-322i437-459o485-507i672-689o
PI (pH):   %s   9.8
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAGYGDRRSP PLEGITVVDG GGSRAQSPVP VPGAGAGRLP PPPGGFARGL MKQPSRLASG VRQFASRVSM KVPEGVAGMR PGRMTRMQSS AQMGLRGLRF LDKTSGGKEG WKAVERRFDD  MTKGSGRLQK ESFGKCIGMG DSKEFAGELF VALARRRNLE PEDGITKEQL KEFWEEMTDQ NFDSRLRIFF DMCDKNGDGM LTEDEVKEVI ILSASANKLA KLKGHAATYA SLIMEELDPD  DRGYIEIWQL ETLLRGMVSA QAPEKLKRTP SSLARTMIPS RYRNPLKRHL SKTVDFIHEN WKRIWLVTLW LVVNLALFVY KFEQYKRRTA FQVMGYCVCV AKGAAEILKL NMALILLPVC  RNTLTTLRST ALSHVIPFDD NINFHKIMAL SIAIATAIHT LAHVTCDFPR LISCPTDKFM ATLGSNFHYK QPTYPDLLES IPGVTGILMI IIMSFSFTLA THSFRRSVVK LPSPLHHLAG  FNAFWYAHHL LVIAYILLVV HSYFIFLTRE WYKKQTWMYL IVPVLFYACE RIIRKFRENN YHAEIVRAAI YPGNVLSIHM KKPQGFKYKS GMYLFVKCPE VSPFEWHPFS ITSAPGDDYL  SVHIRTLGDW TSELRMLFGK ACEAQVTSKK ATLTRLETTV VADARTEDTR FPKVYIDGPY GAPAQNYRKY DILLLIGLGI GATPFISILK DMLNNLKSTE EVESIHGSEI GSFKNNGPGR  AYFYWVTREQ GSFEWFKGVM NEVAESDHSN VIEMHNYLTS VYEEGDARSA LIAMVQSLQH AKNGVDIVSG SKIRTHFARP NWRKVFSDLA NAHRNSRIGV FYCGSPTLTK QLKDLSKEFS 
QTTTTRFHFH KENF 

Retrieve as FASTA  
Remarks Complete sequence from genomic (Chromo 3, 13 introns) and 2 ESTs. Incorrect prediction from Phytozome (large 3'end is missing due to "N" in the sequencing)