Entry information : TsPrx65 (Thhalv10000958m)
Entry ID 9824
Creation 2011-11-18 (Qiang Li)
Last sequence changes 2011-11-21 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-31 (Christophe Dunand)
Peroxidase information: TsPrx65 (Thhalv10000958m)
Name (synonym) TsPrx65 (Thhalv10000958m)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Eutrema
Organism Thellungiella salsuginea (Eutrema salsugineum)    [TaxId: 72664 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TsPrx65
start..stop
S start..stop
BnPrx65-2_other 645 0 1..330 1..330
BrPrx65-1Ab_other 630 0 1..330 1..330
BnPrx65-1_other 624 0 1..330 1..327
AlyPrx65 623 0 1..330 4..334
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2123281..2124273 993  
complement(join(2123281..2124273))


exon

Literature and cross-references TsPrx65 (Thhalv10000958m)
DNA ref. Phytozome 12:   scaffold_20 (2124273..2123281)
Protein sequence: TsPrx65 (Thhalv10000958m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (306)
PWM (Da):   %s   36683.57 (34036.0) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.78 (7.22) Peptide Signal:   %s   cut: 25 range:25-330
Sequence
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Send to Peroxiscan
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MRLSRGPNPF VLLFVLIVAP AVSADVAILR TDYYQKTCPD FNKIVREAVS TKQSQQPTTA AGTLRLFFHD CFLEGCDASV LIATNSFNKA ERDDDLNDSL PGDAFDIVTR IKTALELSCP  SVVSCADILA QATRDLVTMV GGPYFDVKLG RKDGLESKAH KVRGNVPMPN QTVHDIHGMF KKNGFTLREM VALSGAHTIG FSHCKEFSDR LYGPKADPEI NPRFATALKD LCKNHTVDDT 
IAAFNDVMTP GKFDNMYFKN LKRGLGLLAS DHILFKNNRT RPFVELYASD EKAFFEDFAR AMEKLGTVGV KGDKEGEVRR RCDHFNNLNV * 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). No EST.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGTCTCT CTCGTGGCCC TAACCCTTTC GTTCTCCTCT TTGTTCTCAT TGTTGCACCA GCCGTATCGG CCGATGTAGC TATCCTGAGA ACGGACTACT ACCAAAAAAC ATGTCCCGAT  TTCAACAAGA TTGTGCGTGA GGCCGTTTCA ACAAAGCAAT CTCAACAACC AACAACCGCG GCTGGGACAC TCCGTCTCTT TTTCCACGAT TGTTTCCTCG AAGGTTGTGA TGCGTCCGTT  TTGATAGCCA CAAACTCGTT TAACAAAGCA GAACGTGACG ATGATCTCAA CGACTCTCTC CCAGGAGATG CTTTCGACAT CGTCACTAGG ATCAAGACAG CTTTGGAACT GTCTTGTCCG  AGTGTGGTTT CCTGCGCTGA TATTTTAGCG CAGGCTACAC GTGACCTTGT CACGATGGTA GGAGGACCTT ACTTCGATGT GAAGCTTGGT CGTAAAGATG GACTCGAATC CAAAGCACAC  AAAGTCCGAG GAAACGTCCC GATGCCAAAC CAGACGGTCC ACGACATCCA CGGGATGTTC AAGAAAAACG GGTTTACACT ACGCGAGATG GTTGCGTTAA GCGGAGCTCA CACAATCGGA  TTCTCTCACT GCAAAGAGTT TAGTGACCGT CTCTACGGAC CAAAAGCCGA TCCAGAAATC AACCCGCGAT TCGCAACCGC TCTAAAAGAC CTATGCAAAA ACCACACCGT GGACGACACA  ATCGCGGCGT TTAACGACGT GATGACACCA GGAAAATTCG ACAACATGTA CTTCAAGAAC CTAAAAAGAG GGCTAGGGCT TTTGGCTTCC GACCACATCC TTTTTAAGAA CAATAGGACG  AGACCGTTCG TTGAGCTTTA CGCAAGTGAC GAGAAAGCAT TCTTTGAGGA TTTCGCACGT GCGATGGAGA AACTCGGCAC TGTTGGCGTC AAGGGCGACA AGGAAGGAGA AGTGAGACGT 
AGGTGCGACC ACTTCAACAA TCTCAACGTG TAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGTCTCT CTCGTGGCCC TAACCCTTTC GTTCTCCTCT TTGTTCTCAT TGTTGCACCA GCCGTATCGG CCGATGTAGC TATCCTGAGA ACGGACTACT ACCAAAAAAC ATGTCCCGAT  TTCAACAAGA TTGTGCGTGA GGCCGTTTCA ACAAAGCAAT CTCAACAACC AACAACCGCG GCTGGGACAC TCCGTCTCTT TTTCCACGAT TGTTTCCTCG AAGGTTGTGA TGCGTCCGTT  TTGATAGCCA CAAACTCGTT TAACAAAGCA GAACGTGACG ATGATCTCAA CGACTCTCTC CCAGGAGATG CTTTCGACAT CGTCACTAGG ATCAAGACAG CTTTGGAACT GTCTTGTCCG  AGTGTGGTTT CCTGCGCTGA TATTTTAGCG CAGGCTACAC GTGACCTTGT CACGATGGTA GGAGGACCTT ACTTCGATGT GAAGCTTGGT CGTAAAGATG GACTCGAATC CAAAGCACAC  AAAGTCCGAG GAAACGTCCC GATGCCAAAC CAGACGGTCC ACGACATCCA CGGGATGTTC AAGAAAAACG GGTTTACACT ACGCGAGATG GTTGCGTTAA GCGGAGCTCA CACAATCGGA  TTCTCTCACT GCAAAGAGTT TAGTGACCGT CTCTACGGAC CAAAAGCCGA TCCAGAAATC AACCCGCGAT TCGCAACCGC TCTAAAAGAC CTATGCAAAA ACCACACCGT GGACGACACA  ATCGCGGCGT TTAACGACGT GATGACACCA GGAAAATTCG ACAACATGTA CTTCAAGAAC CTAAAAAGAG GGCTAGGGCT TTTGGCTTCC GACCACATCC TTTTTAAGAA CAATAGGACG  AGACCGTTCG TTGAGCTTTA CGCAAGTGAC GAGAAAGCAT TCTTTGAGGA TTTCGCACGT GCGATGGAGA AACTCGGCAC TGTTGGCGTC AAGGGCGACA AGGAAGGAGA AGTGAGACGT 
AGGTGCGACC ACTTCAACAA TCTCAACGTG TAA 

Retrieve as FASTA