Entry information : TsPrx41 (Thhalv10025673m)
Entry ID 9826
Creation 2011-11-18 (Qiang Li)
Last sequence changes 2011-11-21 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-10-22 (Christophe Dunand)
Peroxidase information: TsPrx41 (Thhalv10025673m)
Name (synonym) TsPrx41 (Thhalv10025673m)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Eutrema
Organism Thellungiella salsuginea (Eutrema salsugineum)    [TaxId: 72664 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TsPrx41
start..stop
S start..stop
AlyPrx41 585 0 5..333 1..326
AhalPrx46 581 0 5..333 1..326
BrPrx41-1Ab_other 580 0 6..333 4..329
CagraPrx70 577 0 5..333 1..326
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 9937922..9938923 1002  
complement(join(9937922..9938923))


exon

Literature and cross-references TsPrx41 (Thhalv10025673m)
DNA ref. Phytozome 12:   scaffold_1 (9938923..9937922)
Protein sequence: TsPrx41 (Thhalv10025673m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   334 (308)
PWM (Da):   %s   36994.77 (34236.2) Transmb domain:   %s   i7-26o
PI (pH):   %s   7.75 (7.44) Peptide Signal:   %s   cut: 26 range:26-333
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKATMSSFLS LLSVVLLFVP PILTALETET SLTKDYYQKT CPDFGKIVRE TVTTKQSQQP TTAAGTLRLF FHDCFLEGCD ASVLIATNTF NKAERDDDLN ESLPGDAFDI VTRIKTALEL  SCPGVVSCAD ILAQSTRDLV TMIGGPFYEV KLGRKDGFES KAHKVKGNIP LANHTVQDMM SIFQKNGFTL REMVALSGGH TVGFSHCKEF SSRIFGPQTD PELDAKFAGV LKNLCKDYQV 
NKTMAAFLDP VTPGKFDNMY FKNLRRGLGL LASDHILFKD KSTRPFVELY ANNQTVFFED FARAMEKLGT VGVKGDKDGE VRRRCDHFNK LNV* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAAGCCA CAATGTCATC ATTTCTGAGC CTTCTCTCCG TCGTCTTACT CTTTGTCCCG CCCATATTAA CGGCACTAGA GACAGAGACA AGTTTAACGA AAGATTATTA TCAAAAAACA  TGTCCTGATT TCGGTAAAAT CGTTCGTGAA ACCGTTACAA CGAAGCAATC TCAGCAGCCA ACAACAGCTG CTGGAACGCT TCGTCTTTTT TTCCACGATT GTTTCCTAGA AGGATGTGAC  GCATCCGTTC TAATTGCTAC AAATACTTTC AACAAAGCCG AACGCGACGA TGACCTAAAC GAGTCGCTTC CGGGAGATGC GTTTGACATC GTGACTCGCA TCAAAACCGC TCTTGAATTG  TCTTGTCCCG GGGTTGTGTC TTGCGCAGAC ATCTTGGCTC AGTCCACGCG TGACCTTGTC ACAATGATTG GTGGGCCTTT CTATGAAGTC AAGTTGGGCC GTAAAGATGG ATTTGAGTCG  AAAGCTCATA AAGTGAAAGG AAACATACCA TTAGCAAATC ATACAGTCCA AGACATGATG TCTATATTTC AAAAGAATGG TTTCACTCTA AGGGAGATGG TTGCACTAAG CGGCGGGCAC  ACAGTCGGAT TTTCTCACTG CAAAGAATTC AGTAGCCGGA TCTTTGGACC ACAGACGGAT CCAGAGCTCG ACGCTAAATT CGCAGGGGTG CTCAAAAATC TATGCAAGGA TTACCAGGTC  AATAAAACGA TGGCGGCTTT TCTCGACCCG GTGACGCCGG GAAAATTTGA TAATATGTAT TTTAAGAACT TGAGAAGAGG GCTTGGATTG TTAGCGTCCG ACCACATCTT GTTTAAGGAC  AAAAGCACGA GACCGTTTGT CGAATTATAT GCAAATAATC AGACGGTTTT CTTCGAAGAT TTTGCACGTG CCATGGAAAA ACTAGGCACG GTGGGCGTTA AAGGCGATAA AGATGGAGAG 
GTGAGACGCA GGTGCGATCA CTTCAACAAG CTTAACGTAT AA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAAGCCA CAATGTCATC ATTTCTGAGC CTTCTCTCCG TCGTCTTACT CTTTGTCCCG CCCATATTAA CGGCACTAGA GACAGAGACA AGTTTAACGA AAGATTATTA TCAAAAAACA  TGTCCTGATT TCGGTAAAAT CGTTCGTGAA ACCGTTACAA CGAAGCAATC TCAGCAGCCA ACAACAGCTG CTGGAACGCT TCGTCTTTTT TTCCACGATT GTTTCCTAGA AGGATGTGAC  GCATCCGTTC TAATTGCTAC AAATACTTTC AACAAAGCCG AACGCGACGA TGACCTAAAC GAGTCGCTTC CGGGAGATGC GTTTGACATC GTGACTCGCA TCAAAACCGC TCTTGAATTG  TCTTGTCCCG GGGTTGTGTC TTGCGCAGAC ATCTTGGCTC AGTCCACGCG TGACCTTGTC ACAATGATTG GTGGGCCTTT CTATGAAGTC AAGTTGGGCC GTAAAGATGG ATTTGAGTCG  AAAGCTCATA AAGTGAAAGG AAACATACCA TTAGCAAATC ATACAGTCCA AGACATGATG TCTATATTTC AAAAGAATGG TTTCACTCTA AGGGAGATGG TTGCACTAAG CGGCGGGCAC  ACAGTCGGAT TTTCTCACTG CAAAGAATTC AGTAGCCGGA TCTTTGGACC ACAGACGGAT CCAGAGCTCG ACGCTAAATT CGCAGGGGTG CTCAAAAATC TATGCAAGGA TTACCAGGTC  AATAAAACGA TGGCGGCTTT TCTCGACCCG GTGACGCCGG GAAAATTTGA TAATATGTAT TTTAAGAACT TGAGAAGAGG GCTTGGATTG TTAGCGTCCG ACCACATCTT GTTTAAGGAC  AAAAGCACGA GACCGTTTGT CGAATTATAT GCAAATAATC AGACGGTTTT CTTCGAAGAT TTTGCACGTG CCATGGAAAA ACTAGGCACG GTGGGCGTTA AAGGCGATAA AGATGGAGAG 
GTGAGACGCA GGTGCGATCA CTTCAACAAG CTTAACGTAT AA 

Retrieve as FASTA